Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1636 ATGGCGCTCAATATCTCTTCTCCCCCTGAAGTCAAGTCCCTTTTTTTCTCTGATTCCTTCAAGTCTAATTGTCTCTCAGCAAAATTCCCAGGTGGTTTTGCTTTTAAAAGAAAAGATGGTGGAAGGCGAGTTAATTGCTCACTGCAGGCATCACCACAACCACCACCAGCCTGGCCCGGACGAGCGTATCCAGAACAGGTTGGCAAGACTTGGGAGGGACCAAAACCCATTTCTATTGTGGGATCTACTGGTTCTATTGGAACTCAGACTCTAGATATTGTGGCAGAGAATCCAGACAAGTTTAAAGTTGTGGCACTTGCAGCTGGTTCAAACGTTACTCTTCTTGCAGACCAGATAAAAACATTTAAGCCTCAACTTGTTGCTGTTAGAAACGAGTCGCTAATAGCTGAACTTGAAGAGGCTTTGCATGATGTTGAACAGAAACCTGAGATCATCCCTGGAGAGCAGGGAATCGTTGAGGTTGCTCGTCACCCAGATGCAGTCAGTGTAGTCACAGGAATAGTAGGGTGTGCAGGACTGAAGCCGACAGTTGCTGCGATAGAAGCAGGGAAAGACATAGCTTTGGCCAACAAAGAGACGTTGATTGCTGGAGGTCCTTTTGTCCTTCCTCTTGCTCAGAAGCATAACGTAAAAATACTTCCTGCTGATTCGGAACATTCTGCCATTTTTCAGTGTATCCAGGGGTTACCAGAGGGTGCACTTAGGCGCATTATTCTAACAGCATCTGGAGGTGCTTTTAGGGATTTGCCAGTTGAAAAGCTGAAAGATGTTAAAGTAGCTGATGCATTAAAACATCCCAACTGGAATATGGGGAAAAAGATAACTGTGGACTCTGCTACACTCTTTAACAAGGGTCTAGAAGTAATTGAAGCACATTACCTATTTGGAGCTGACTATGATGATATTGAGATTGTCATTCATCCGCAATCAATCATACATTCAATGATTGAAACACAGGATTCATCTGTTCTTGCACAACTAGGGTGGCCTGATATGCGGTTGCCGATCCTCTATACATTATCATGGCCTGACAGGGTTTATTGTTCTGAAGTCACTTGGCCACGCCTTGATCTTTGCAAGCTTGGTTCACTTACATTTAAAACTCCAGACAATGTAAAGTATCCATCCATGAATCTTGCCTATGCTGCTGGTCGTGCTGGAGGAACAATGACAGGAGTTCTGAGTGCAGCAAATGAGAAAGCTGTAGAGATGTTTATTGATGAAAAGATTAGCTATTTGGATATATTCAAAGTGGTGGAGCTAACATGTGAGAAGCATCAAAATGAATTGTTGTCCTCGCCTTCCCTTGAAGAAATTATTCACTATGATCTGTGGGCACGAAAATATGCTGCTAGTTTGCAAGACTCTTCCACCTTCACACCTATTCTTGCATGA 1416 0.4343 MALNISSPPEVKSLFFSDSFKSNCLSAKFPGGFAFKRKDGGRRVNCSLQASPQPPPAWPGRAYPEQVGKTWEGPKPISIVGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQIKTFKPQLVAVRNESLIAELEEALHDVEQKPEIIPGEQGIVEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDLPVEKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGADYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEVTWPRLDLCKLGSLTFKTPDNVKYPSMNLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCEKHQNELLSSPSLEEIIHYDLWARKYAASLQDSSTFTPILA* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1636 471 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE-RELATED 1 470 - -
Vra7g1636 471 Pfam DXP reductoisomerase C-terminal domain 334 455 IPR026877 -
Vra7g1636 471 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 1 470 IPR003821 GO:0008299|GO:0030604|GO:0046872
Vra7g1636 471 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 200 337 - -
Vra7g1636 471 TIGRFAM Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 75 457 IPR003821 GO:0008299|GO:0030604|GO:0046872
Vra7g1636 471 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain 219 302 IPR013644 GO:0005515
Vra7g1636 471 SUPERFAMILY 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 367 461 IPR036169 -
Vra7g1636 471 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 74 223 IPR036291 -
Vra7g1636 471 Gene3D - 379 463 - -
Vra7g1636 471 Hamap 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 77 460 IPR003821 GO:0008299|GO:0030604|GO:0046872
Vra7g1636 471 PIRSF Dxp_reductoisomrs 74 466 IPR003821 GO:0008299|GO:0030604|GO:0046872
Vra7g1636 471 Coils Coil 128 148 - -
Vra7g1636 471 Gene3D - 69 223 - -
Vra7g1636 471 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase 77 205 IPR013512 GO:0070402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1636 Vra-Chr7 34822377 34827066 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1636 K00099 - gmx:100790607 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1636 7 34822377 34827066 Vra7g1636 7 34822377 34827066 ECH