Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1628 ATGTTACCTCCCGTTCCTGTTCCTATTGCTGTTGATATCAACGCTATAAAAGATAAGCTCTCCTTTCACTTGCGACCTTGGCAACGTTCTTTCCAATTCTGGGTTCGAGCCATTGACATTTACACCGGATACAAGGTGTTTCAAGTGAGAGTCAATTTCGTCAAAGATGTCCAGAAGCAGGAAGCAATGTGGGAACGACAGCACGAGCTTGCTGCCGATAAGATTTTTGCCTTGTGTTCTGACCTCGGTGGTTTCTTCCTCAAGATTGCCCAAATTATAGGGAAGCCTGATTTGGCTCCGGCTGCATGGGTGAAAAGACTTGTTACGCTGTGTGATAGGGCTCCTCCTACCCCTTTTGATGTGATGAAACTAGTTTTGGAGAACGAGCTGGAACAGGGTATTGATGATGTGTTCGAGAGGTTCGATGTTGAACCCCTAGGTTCTGCTTCAATTGCTCAGGTTCATAGAGCAAGACTGAAAGGTGATACAAGTGATGTTGTCGTCAAGGTTCAACATCCAGGAATTCAGGATCTGATGATGACAGATATCCATAACTTGCAAGCGTTTGCACTGTACATGCAAAAGACAGATATCAAATTTGATCTATATTCGGTGACTAAGGAGATGGAAAAACAGATTGGATATGAATTTGATTTCAAGAGGGAGGCTGATGCGATGGAAAGGATAAGAAAGTTCTTGTATGAGAATAACAAAAAGACTCCTGTTTTGGTGCCACGAGTAATACGAGATATGGTTACCAGGAGGGTCCTAGTCATGGAATATATTGATGGGGTTCCAATAATGAACCTTGGTGATGAAATAGCAAAGAGAGGCATAAATCCTCGTGGTAAGGTTGCGGCAGCAGCAAAGCAGAAAATTCTTCAAAGCTTGACTCTAGCATATGGTCAAATGATTTTAAAAAGTGGATTCTTCCATGCAGATCCTCATCCTGGGAACATCCTGATTTGTAAAGGATCAGAGGTTGCCTTGCTAGACTACGGGCAGGTGAAAGATCTCCCAGAACAGTTGAGGCTTGGCTATGCTAATCTAGTTCTTGCAATTGCCAATCGGGACCCATTAAGAGCTGCAGAGAGCTATAGGGAACTTGGTATAGAAACCTTGAGCAGTTGTGAAAATGGGCTACAAGAATTGTTTAGACTAGCAGAGACAATGTTTGATACAAAATTGCCTCCTGGGGTTGTAATGCTGCAACCTTTCTCAGATGAATCTTCAATTAAAAAAGTTGCTGTTCAGTCCTTTCCAGAAGAACTTTTTTCTGTACTTCGGACAGTGCATCTACTGAGGGGACTTAGCGTTGGACTTGGAATCAATTATTCTTGTGCAGAACAGTGGAGGCCCTTTGCAGAAGAAGCTTTGTCCCAAGCTGGCAGATTAAAAGATAAGAATGTTAAGAGCAGAGGCAGGTAA 1428 0.4293 MLPPVPVPIAVDINAIKDKLSFHLRPWQRSFQFWVRAIDIYTGYKVFQVRVNFVKDVQKQEAMWERQHELAADKIFALCSDLGGFFLKIAQIIGKPDLAPAAWVKRLVTLCDRAPPTPFDVMKLVLENELEQGIDDVFERFDVEPLGSASIAQVHRARLKGDTSDVVVKVQHPGIQDLMMTDIHNLQAFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFKREADAMERIRKFLYENNKKTPVLVPRVIRDMVTRRVLVMEYIDGVPIMNLGDEIAKRGINPRGKVAAAAKQKILQSLTLAYGQMILKSGFFHADPHPGNILICKGSEVALLDYGQVKDLPEQLRLGYANLVLAIANRDPLRAAESYRELGIETLSSCENGLQELFRLAETMFDTKLPPGVVMLQPFSDESSIKKVAVQSFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPFAEEALSQAGRLKDKNVKSRGR* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1628 475 SUPERFAMILY Protein kinase-like (PK-like) 112 338 IPR011009 -
Vra7g1628 475 PANTHER ABC1 FAMILY PROTEIN 13 472 - -
Vra7g1628 475 PANTHER - 13 472 - -
Vra7g1628 475 ProSiteProfiles Protein kinase domain profile. 140 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1628 475 Pfam ABC1 atypical kinase-like domain 110 364 IPR004147 -
Vra7g1628 475 Gene3D Transferase(Phosphotransferase) domain 1 136 349 - -
Vra7g1628 475 CDD ABC1_ADCK3-like 110 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1628 Vra-Chr7 34742496 34750682 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1628 K08869 - gmx:100813009 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1628 7 34742496 34750682 Vra7g1628 7 34742496 34750682 ECH