Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1624 ATGGCTTCCTCTGTGACATCCATGTCTTCTTCTACCATCCTCCTCATTACCATCTGCACACTGTCCTCAATTCTGTCACTTCCTTATGCAACAGCATCTGTGGAAGGAAGGACAAGACCCTTTAAGAGGGTTTATGCCTTTGGGGATTCTTTTACTGACACCGGCAACACCAAGAACGCAGAAGGTCCAAGCGGCTTTGGCCATGTCTCAAACTCTCCCTACGGTACCACTTTCTTCAACCATTCCACCAACAGGTACTCAGATGGAAGGCTTGTGATTGACTTCGTGGCCGAAGATCTTTCTCTGCCTTATTTGCCCCCTTATCGTCACCGCAAAGGCAACGACACTTTCGGTGTTAACTTTGCCGTTGCAGGTTCCACAGCCATAAACCACTTGTTCTTTGTGAAGAACAACCTCTCCCTTGACATCACTCCTCAGTCCATCCAAACTCAGATGATATGGTTCAACAGGTACCTGGAAAGCCGGGAATGTGAAGAATCAAAGTGCAAAGACTTCGACGATACTCTATTTTGGTTTGGGGAGATCGGTGTCAACGACTATGCCTACACTCTTGGATCTACCGTCCCAGATGATACCATAAGGAAGCTTGCAATCAGCAGTGTCTCAGGAGCATTACAGGCATTGCTAGAGAAGGGTGCGAAATACCTAGTCGTGCAGGGTTTACCTCTGACTGGGTGTTTAACATTGTCCATGTATCTGGCTCCTCCAGATGATAGGGATGAGCTTGGGTGTGTGAAAAGTGTGAACAACCAAAGCAACTACCACAACCTTGTGCTGCAAAACAAACTAGAGGAATTTAGGAAACAGTACCCCCAAGCTGTCATACTTTATGCTGATTACTTCAACGCCTACCGGACTGTCATGAAGAATCCGACCAAGTATGGATTCAAAGAAGTGTTCAATGTTTGTTGTGGATCAGGAGAACCACCTTACAACTTCAGTGTGTTTGGCACGTGTGGCACACCTAACGCCACTGCCTGTACAAACCCTTCTCAGTACATAAATTGGGATGGTGTTCATCTCACTGAGGCTATGTATAAAGTAATTTCTAGCATGTTTCTGCAAGGAAACTTCACCCAACCTCCGTTTAATTTTTTGTTGGCAAAAAAAGAGAGGGCGGGGTGA 1146 0.4607 MASSVTSMSSSTILLITICTLSSILSLPYATASVEGRTRPFKRVYAFGDSFTDTGNTKNAEGPSGFGHVSNSPYGTTFFNHSTNRYSDGRLVIDFVAEDLSLPYLPPYRHRKGNDTFGVNFAVAGSTAINHLFFVKNNLSLDITPQSIQTQMIWFNRYLESRECEESKCKDFDDTLFWFGEIGVNDYAYTLGSTVPDDTIRKLAISSVSGALQALLEKGAKYLVVQGLPLTGCLTLSMYLAPPDDRDELGCVKSVNNQSNYHNLVLQNKLEEFRKQYPQAVILYADYFNAYRTVMKNPTKYGFKEVFNVCCGSGEPPYNFSVFGTCGTPNATACTNPSQYINWDGVHLTEAMYKVISSMFLQGNFTQPPFNFLLAKKERAG* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1624 381 PANTHER LIPASE/HYDROLASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 13 378 - -
Vra7g1624 381 Pfam GDSL-like Lipase/Acylhydrolase 44 358 IPR001087 GO:0016788
Vra7g1624 381 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 13 378 - -
Vra7g1624 381 SUPERFAMILY SGNH hydrolase 41 361 - -
Vra7g1624 381 CDD SGNH_plant_lipase_like 44 364 IPR035669 -
Vra7g1624 381 Gene3D SGNH hydrolase 33 364 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1624 Vra-Chr7 34725119 34726567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1624 44 363 Acyl Lipid Metabolism Gene Families AT4G10950 26.807 1.79e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1624 - - gmx:100810163 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1624 7 34725119 34726567 Vra7g1624 7 34725119 34726567 ECH