Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1573 ATGTCTATAACCTATAACCTCACTACTTCACTCTCTTCTACTTCTTCTGCTTTCTTAGCTCCATCTTCTTTCAATTCTAGGGGACATGTTTCATTGCCTGTGAAGGGCGTGGGCATTTGCAAATGCATTGCGACACCCGAAGCTGAGACTGGCTACAAGACAAAGGTCACTCGTAATCCAAATTTGGGGAAACTTCAAGCTGGCTATCTATTTCCTGAGATTGCTAGGAGAAGGTCTGCACACTTGCTGAAGTACCCTGATGCTAAAGTTATAAGCCTTGGAATTGGTGACACTACTGAACCTATTCCTGAAGTCATAACTGATGCAATGTCGAAGAGATCACAAGGATTATCAACTGTTAAAGGATATAGTGGGTATGGTGCGGAACAAGGTGAAAAGCCATTAAGAAGTGCAATTGCTTCAACATTTTACAGCGATCTTGGCATAGAAGAGGATGATATATTTGTGTCAGATGGAGCAAAGTGTGATATATCTCGTCTCCAGATTGTCTTCGGGTCAAATGTAAAAATGGCTGTACAAGACCCTTCATACCCGGCCTATGTAGACTCAAGTGTAATTATGGGCCAGACTGGCCTCTACCAGAAGGATGTTGAGAAGTTTGCAAACATTGAATACATGAGGTGTAGTCCGGAAAATGGTTTCTTCCCTGATTTATCTTCAATTTCTCGACCAGACATAATCTTTTTCTGTTCGCCAAACAATCCTACTGGTGCTTCAGCAACAAGGGAACAACTGACCCAACTTGTTCAGTTTGCTAAGGACAACGGTAGTATAGTAATCCATGATTCAGCTTATGCAATGTATATTTCCGGTGACAACCCACGTTCCATCTTTGAAATTCCTGGAGCCAAGGAGGTTGCCATTGAGACATCATCATTCAGCAAGTATGCTGGGTTCACAGGAGTCCGATTAGGCTGGACTGTGATTCCAAAGGAGTTGCTGTTTTCTGATGGATTTCCTGTTGCCAGGGACTTCAACCGTATTGTATGCACTTGTTTCAATGGTGCATCAAATATTTCCCAGGCAGGTGGTTTGGCTTGCCTTTCACCAGAAGGTCTTAAGGCTATGGGAGAAGTTATTGGATTCTACAAAGAAAATACGAACATAATTGTGGAGACATTTGATTCTCTTGGATTCAAAGTGTATGGAGGGAAAGATGCACCATATGTGTGGGTTCATTTCCCTGGCAGAAGCTCATGGGATGTATTTGGTGAGATTCTTGAGAAGACTCATGTGGTTACAACTCCTGGTAGTGGTTTTGGACCTGGTGGTGAAGGTTTTGTCAGGGTTAGTGCCTTTGGTCACAGGGAAAACGTCTTGGAGGCATGCAGAAGGTTCAAGCAGCTATACAAGTGA 1377 0.4306 MSITYNLTTSLSSTSSAFLAPSSFNSRGHVSLPVKGVGICKCIATPEAETGYKTKVTRNPNLGKLQAGYLFPEIARRRSAHLLKYPDAKVISLGIGDTTEPIPEVITDAMSKRSQGLSTVKGYSGYGAEQGEKPLRSAIASTFYSDLGIEEDDIFVSDGAKCDISRLQIVFGSNVKMAVQDPSYPAYVDSSVIMGQTGLYQKDVEKFANIEYMRCSPENGFFPDLSSISRPDIIFFCSPNNPTGASATREQLTQLVQFAKDNGSIVIHDSAYAMYISGDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVARDFNRIVCTCFNGASNISQAGGLACLSPEGLKAMGEVIGFYKENTNIIVETFDSLGFKVYGGKDAPYVWVHFPGRSSWDVFGEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENVLEACRRFKQLYK* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1573 458 Gene3D Aspartate Aminotransferase, domain 1 70 454 IPR015422 GO:0003824
Vra7g1573 458 Pfam Aminotransferase class I and II 89 453 IPR004839 GO:0009058|GO:0030170
Vra7g1573 458 CDD AAT_like 91 455 - -
Vra7g1573 458 Gene3D - 100 357 IPR015421 GO:0003824
Vra7g1573 458 Hamap LL-diaminopimelate aminotransferase [dapL]. 57 456 IPR019942 GO:0008483
Vra7g1573 458 PANTHER LL-DIAMINOPIMELATE AMINOTRANSFERASE, CHLOROPLASTIC 8 458 - -
Vra7g1573 458 TIGRFAM DAPAT_plant: LL-diaminopimelate aminotransferase 57 455 IPR019942 GO:0008483
Vra7g1573 458 SUPERFAMILY PLP-dependent transferases 69 453 IPR015424 -
Vra7g1573 458 PANTHER AMINOTRANSFERASE 8 458 IPR019942 GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1573 Vra-Chr7 34009136 34018758 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1573 K10206 - gmx:100801405 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1573 7 34009136 34018758 Vra7g1573 7 34009136 34018758 ECH