Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1572 ATGGAAGATTACAATTTTTTTGTTGGTCAAGAGTTCCCAGATGTGAAGGCATTTCGGAATGCAATTAAAGAAGCTGCCATTGCACAGCATTTTGAGCTCCGTACTATTAAAAGTGACCTGATTCGCTACTTTGCCAAGTGTGCCTCAGATGGTTGTCCATGGCGGATTCGTGCTGTCAAGCTCCCTAATGCCCCAACATTTACTATTAGAAGTATTGATGGCACACATACTTGTGGGAGGAATGCAAACAATGGGCACCATCAGGCTTCTGTTGACTGGATTGTGAGTTTCATTGAAGAAAGATTGCGAGACAATATTAATTATAAACCAAAGGATATTTTACATGACATCCATAAACAATATGGTATAACTATACCTTATAAGCAAGCTTGGCGTGCAAAGGAGCGGGGTCTTGCAGCTATATATGGATCTTCTGAAGAAGGATATTACCTACTTCCTTCATACTGTGAAGAAATTAAGAAAACAAACCCTGGAAGTGTTGCAGAGGTGTTTACCGCTGGTGAAGATAACCGTTTTCAGAGACTTTTTGTTTGCTTTCGTGCATCAATCTATGGTTTTTTTAATGGTTGCTTGCCAATTGTTGGACTTGGTGGAATCCAGCTGAAAAGCAAATACCTTAGCACATTGCTTTCAGCAACTTCTTTTGATGCTGATGGTGGATTGTTTCCGCTTGCTTTTGGTGTTGTTGATGTAGAAAATGATGATAGCTGGACATGGTTCCTGTCTGAGTTGCATAGGGTTCTGGAGGGGAATACTGAATGCATGCCAGAGTTTATATTTTTATCAGATGGGCAACAGGGTATTACGGATACAGTGAGAAGTAAGTTCCCAAGTTCTTCTCATGCATTCTGCATGCGTCACTTGACTGAAAGCATTAGTAAAGAGTTCAAGAACTCTAGGCTTGTCCATCTTCTGTGGAAGGCTGCATATGCCACCACAACCATTGCATTTAAAGAAAAAATTGCTGAAATAGAGGAGGTATCTCCGGAAGCTGCTAAATGGTTACAACATTTTGATCCTTCTCAATGGGCCCTTGTGCATTTTAAAGGGACACGATTTGGCCATCTATCCTCAAACATTGATGAGTTCACCAAATGGATTCTTGATGCTCGAGAATTGCCAATTATCCAGGTGATGGAGCGGATTCATAGCAAGCTTAAAACTGAGTTTGATGACAGGCGGATAAAAAGCAGCTCATGGTGCTCTGTACTCGCCCCTTCTGCCGAGAAGCTAATGAATGAAGCCATCAACCGTGCATCTATATATCAAGTCCTTAGATCAGATGAAGTAGAATTTGAGGTTCTTTCAGCTGATCGATCGGACATTGTAAATATTGGCAGCTATAGTTGTTCCTGCCGCGACTGGCAGCTAAATGGTATTCCTTGTTCACATGCTGCTGCTGCTCTTATCTCATGTCGGAAGGATGTCTATGCATATACCCACAAGAGTTTTACTGTTGCAAGTTACAGGAATACCTATGCAGAGAGTATACACTACATCCCAGCAAAACTTGAATGGAGTAAAACAGACAAGTCTTCTATGGATGATAATATCCTAGTTGTACGACCACCAAAATTACGGCGACCACCGGGACGCCCTGAGAAAAGGATGTGTGTGGATGAGCTTAGTCGTGAGAAACATACAGTGCACTGTAGTCGGTGCAACCAAACTGGACATTACAAGAGAACCTGTAAAGCAGAAATGATTAATAGTATAGAGCAGTTTTAA 1749 0.4157 MEDYNFFVGQEFPDVKAFRNAIKEAAIAQHFELRTIKSDLIRYFAKCASDGCPWRIRAVKLPNAPTFTIRSIDGTHTCGRNANNGHHQASVDWIVSFIEERLRDNINYKPKDILHDIHKQYGITIPYKQAWRAKERGLAAIYGSSEEGYYLLPSYCEEIKKTNPGSVAEVFTAGEDNRFQRLFVCFRASIYGFFNGCLPIVGLGGIQLKSKYLSTLLSATSFDADGGLFPLAFGVVDVENDDSWTWFLSELHRVLEGNTECMPEFIFLSDGQQGITDTVRSKFPSSSHAFCMRHLTESISKEFKNSRLVHLLWKAAYATTTIAFKEKIAEIEEVSPEAAKWLQHFDPSQWALVHFKGTRFGHLSSNIDEFTKWILDARELPIIQVMERIHSKLKTEFDDRRIKSSSWCSVLAPSAEKLMNEAINRASIYQVLRSDEVEFEVLSADRSDIVNIGSYSCSCRDWQLNGIPCSHAAAALISCRKDVYAYTHKSFTVASYRNTYAESIHYIPAKLEWSKTDKSSMDDNILVVRPPKLRRPPGRPEKRMCVDELSREKHTVHCSRCNQTGHYKRTCKAEMINSIEQF* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1572 582 Pfam MuDR family transposase 6 69 IPR004332 -
Vra7g1572 582 PANTHER OS01G0334000 PROTEIN 1 573 - -
Vra7g1572 582 SMART 26again6 455 482 IPR006564 GO:0008270
Vra7g1572 582 PANTHER POLYPROTEIN, PUTATIVE-RELATED 1 573 - -
Vra7g1572 582 Pfam MULE transposase domain 209 296 IPR018289 -
Vra7g1572 582 ProSiteProfiles Zinc finger SWIM-type profile. 439 480 IPR007527 GO:0008270
Vra7g1572 582 Pfam SWIM zinc finger 446 479 IPR007527 GO:0008270
Vra7g1572 582 ProSiteProfiles Zinc finger CCHC-type profile. 558 572 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1572 Vra-Chr7 34002154 34006278 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1572 - - gmx:100800865 1089.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1572 7 34002154 34006278 Vra7g1572 7 34002154 34006278 ECH