Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1502 ATGGAGTGTTACTATGATGTGCCAGAGGGAGTGGATATTCGGGGAAGATATGATGCAGAGTTTGCAAAAATCCTGACAAAAGATGCTTTGAAATTCGTTGCTGAGCTTCAACGTGAGTTCAGGAACCATATCAAGTATGCATTAGAGAAGAGAAGAGAGGCAAAGAGGAGGTACAATGAAGGGGCTCTTCCGGGGTTCGATCCTGCCACCAGGTACATAAGAGAGAAAGAATGGGTGTGTGCACCTGTTCCACCAGCTGCTGCAGATAGGAAAGTGGAAATCACTGGTCCTGTCGAAAGAAAGATGATCATCAATGCTCTCAACTCTGGTGCTAAAGTCTTCATGGCTGATTTTGAAGATGCACTGTCACCCAGCTGGGAAAATCTTATGAGAGGCCAAGTGAACTTGAAGGATGCCGTGGATGCCACCATAAGCTTCCATGACAAAGTAAGAAACAGGGTTTACAAGCTCAATCATCCAACAGCAAAGCTTTTTGTGCGACCAAGAGGTTGGCACCTACCCGAGGCACATATATTCATTGATGGTGAACCTGCAACCGGTTGCATTGTTGATTTTGGCCTCTTTTTCTATCACAATCACTCGGAATTTCGGCGCACTCAAGGTGCTGGCTTTGGCCCCTTCTTTTATCTTCCCAAAATGGAGCATTCAAGGGAAGCAAAGATATGGAACAGCGTGTTTGAGAAGGCTGAGAAGGTGGTAGGCATCGAAAGAGGAAGCATAAGGGCGACGGTTCTGATAGAAACACTTCCTGCAGTGTTTCAAATGAATGAAATTCTGTATGAACTGAAGGAACACTCGGTGGGTCTGAACTGTGGACGTTGGGATTACATTTTCAGTTATGTGAAGACCTTCCAGGCTCACCCAGATCGCCTCCTACCTGATAGGGTGCAGGTTGGCATGACTCAACACTTCATGAAAAGCTACTCTGATCTTCTCATCAGGACGTGTCACAGGCGCGGTGTGCATGCGATGGGAGGAATGGCGGCGCAGATTCCAATCAAAGAGGATCCGGTGGCTAATGAGTTAGCACTGGAACTTGTGAGGAAGGACAAACTTAGAGAAGTGAAGGCAGGGCACGATGGGACTTGGGCAGCACACCCAGGTCTCATTCCAGCTTGCATGGAGGTTTTCAACAACATCATGGGCAATGCTCCAAACCAGATCGAGACGAACCAACGTGAAGATGCTGCAAACATAACTGAGGAAGACCTATTGCAGACACCAAGAGGAGGGCGCACTATGGAAGGTCTGAGATTGAACACAAGGGTGGGGATTGAGTACGTGGCAGCATGGCTGAGTGGAAGCGGTTCGGTGCCTCTTTACAACCTGATGGAAGATGCTGCGACTGCTGAGATTAGCAGGGTGCAGAACTGGCAGTGGCTCAAGTATGGAGTGGAACTGAATGGGGATGAAGTTGGAGTGAGAGTGAACAGAGAAGTTTTCGGTAGGGTGGTTGAAGAAGAGATGGCAAGGATTGAAAAGGAAGTTGGGAAAGAGAAGTTGAAGAAGGGAATGTACAAGGAGGCTTGCAAGATCTTCACTCGCCAATGCACCTCTCCAACACTTGATGATTTTCTCACTCTGGAAGCCTATAATTACATAGTCCTCCATCATCCCAGAGAATCTTCAAAACTTTGA 1659 0.4744 MECYYDVPEGVDIRGRYDAEFAKILTKDALKFVAELQREFRNHIKYALEKRREAKRRYNEGALPGFDPATRYIREKEWVCAPVPPAAADRKVEITGPVERKMIINALNSGAKVFMADFEDALSPSWENLMRGQVNLKDAVDATISFHDKVRNRVYKLNHPTAKLFVRPRGWHLPEAHIFIDGEPATGCIVDFGLFFYHNHSEFRRTQGAGFGPFFYLPKMEHSREAKIWNSVFEKAEKVVGIERGSIRATVLIETLPAVFQMNEILYELKEHSVGLNCGRWDYIFSYVKTFQAHPDRLLPDRVQVGMTQHFMKSYSDLLIRTCHRRGVHAMGGMAAQIPIKEDPVANELALELVRKDKLREVKAGHDGTWAAHPGLIPACMEVFNNIMGNAPNQIETNQREDAANITEEDLLQTPRGGRTMEGLRLNTRVGIEYVAAWLSGSGSVPLYNLMEDAATAEISRVQNWQWLKYGVELNGDEVGVRVNREVFGRVVEEEMARIEKEVGKEKLKKGMYKEACKIFTRQCTSPTLDDFLTLEAYNYIVLHHPRESSKL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1502 552 ProSitePatterns Malate synthase signature. 270 285 IPR019830 GO:0004474|GO:0006097
Vra7g1502 552 CDD malate_synt_A 24 542 IPR006252 GO:0004474|GO:0006097
Vra7g1502 552 SUPERFAMILY Malate synthase G 8 542 IPR011076 GO:0003824
Vra7g1502 552 Gene3D Malate synthase, domain III 418 542 IPR044856 -
Vra7g1502 552 PIRSF Malate_synth 3 543 IPR006252 GO:0004474|GO:0006097
Vra7g1502 552 PANTHER MALATE SYNTHASE 5 552 - -
Vra7g1502 552 TIGRFAM malate_syn_A: malate synthase A 24 541 IPR006252 GO:0004474|GO:0006097
Vra7g1502 552 PANTHER MALATE SYNTHASE 5 552 IPR006252 GO:0004474|GO:0006097
Vra7g1502 552 Pfam Malate synthase 12 542 IPR001465 GO:0004474|GO:0006097
Vra7g1502 552 Gene3D Malate synthase, domain 3 7 417 IPR046363 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1502 Vra-Chr7 32328619 32331012 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1502 K01638 - gmx:732628 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1502 7 32328619 32331012 Vra7g1502 7 32328619 32331012 ECH