Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1488 ATGGCAATGGCAACAATGGGAGAGAGTCCTCGGAGCCCAGAAGCGAAATTGGGTATGCGAGTTGAGGATCTTTGGGACGTTCAAGAGGCACAGCTAAGTCCTACCGAGAAACTCAACGCTTGTTTTGAAAGCATCCCTGTCTCTGCGTTTCCTTTGGCTCCTTCAAACCAAGAAATTGAGATCAAATCAGACGCCACCTTGGCCGAGGCTGTTATGAAACTCGCACGACACAATGTTTTCAGTGCACCTGTGGTGGATGTTGATGCTCCTGAAGATGCTAGTTGGATTGATAGATACATCGGAATTGTTGAGTTTGCTGGAATTGTTGTATGGATCTTGCATCAGTCTGAACCTGCATCACCTAGGAGTCCATCTACTCCAACCAGTGCAAAGGCTATTGCAGCTGCAGCTAATGGACTGAGTTTTGCTCTGGAACTTGAAGCCTTAGGCCTTGGATCTGCTGCAACAACTGCAGGAAACTTTTTTGTAGATCTTACTTCATCTGAACTTTATAAGAATACCACGGTTCGTGACATTGCAGGGACATTCCGCTGGGCCCCATTTCTTGCTCTAGAGAGATCAAACTCATTTCTAACCATGCTCTTGTTGCTTTCGAAGTACAAGATGAAGAGTGTCCCTGTGTTGGATTTAGGCTCTGGTACAATAGATAAGATTATTACACAATCTGCCGTGATTCATATGCTGGCAGAATGCGCTGGACTTCAGTGGTTTGAAAGTTGGGGAACCAAGAAAATATCTGAAGTTGGTCTTCCCCTGGTTACACCGGATCAGATCATAAAGGTTTATGAGGATGAACCAGTCCTTCAAGCATTTAAAGTAATGAGAAAAAAGAGGGTTGGAGCAGTGCCTGTAATTGAGAGAGATAGTGGAAAGGCAGTTGGTAATATAAGCTTGCGAGATGTTCAATTCTTGTTAAATGCTCCGGAAATATACCATGATTATAGAGCGATTACTGTAAAGGACTTCCTGACAGCGGTTAGAAGTTACTTGGAGAAGAACAAAAACGCATTCCCAATGGTAAGTGAATATGTTACATGCAGAGAGGACTGTACAGTGAAAGAGTTGATTCAACTGCTGGATCAAGAGAAGATTCATAGGGTGTATGTGGTGGACAATGATGGGAATCTGCAAGGACTAATCACACTAAGAGATATAATATCAAGACTAGTACATGAACCCCGTGGCTATTTTGGTGATTTCTTTGATGGTGTTCTTCCTCTGCCTGCAAATACCAGAGTTTAA 1263 0.4331 MAMATMGESPRSPEAKLGMRVEDLWDVQEAQLSPTEKLNACFESIPVSAFPLAPSNQEIEIKSDATLAEAVMKLARHNVFSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSEPASPRSPSTPTSAKAIAAAANGLSFALELEALGLGSAATTAGNFFVDLTSSELYKNTTVRDIAGTFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVLDLGSGTIDKIITQSAVIHMLAECAGLQWFESWGTKKISEVGLPLVTPDQIIKVYEDEPVLQAFKVMRKKRVGAVPVIERDSGKAVGNISLRDVQFLLNAPEIYHDYRAITVKDFLTAVRSYLEKNKNAFPMVSEYVTCREDCTVKELIQLLDQEKIHRVYVVDNDGNLQGLITLRDIISRLVHEPRGYFGDFFDGVLPLPANTRV* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1488 420 CDD CBS_pair_SF 201 308 - -
Vra7g1488 420 Gene3D - 249 399 IPR046342 -
Vra7g1488 420 Gene3D - 35 240 IPR046342 -
Vra7g1488 420 ProSiteProfiles CBS domain profile. 54 120 IPR000644 -
Vra7g1488 420 SMART cbs_1 264 313 IPR000644 -
Vra7g1488 420 SMART cbs_1 349 397 IPR000644 -
Vra7g1488 420 SMART cbs_1 57 113 IPR000644 -
Vra7g1488 420 ProSiteProfiles CBS domain profile. 346 404 IPR000644 -
Vra7g1488 420 CDD CBS_pair_SF 61 120 - -
Vra7g1488 420 CDD CBS_pair_SF 263 393 - -
Vra7g1488 420 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 3 420 - -
Vra7g1488 420 SUPERFAMILY CBS-domain pair 249 406 IPR046342 -
Vra7g1488 420 Pfam CBS domain 346 397 IPR000644 -
Vra7g1488 420 Pfam CBS domain 264 308 IPR000644 -
Vra7g1488 420 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1-RELATED 3 420 - -
Vra7g1488 420 SUPERFAMILY CBS-domain pair 30 236 IPR046342 -
Vra7g1488 420 ProSiteProfiles CBS domain profile. 260 321 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1488 Vra-Chr7 32198731 32202298 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1488 - - gmx:100812388 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1488 7 32198731 32202298 Vra7g1488 7 32198731 32202298 ECH