Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1467 ATGCATCAGTTATCACCCACCTCAACTTTCTGTGAAAGGAATGAGGGCCACCCAAAGATATCGAATCCCCAATTACAGGTTGAGACCAACATGTGCACCAGTTTGATCCCCAAATCCCCAACATCATGTCAACAACATCATCACCAAACACAAAATCCCAACAAAACCCATTTCTCCCTGGCCCTCCTCCAAGCCAAATGTATTTCCAACATATCCTTCTCCATGATCCTAACTGGTCTATTACTCTATTCTCGCTCCATGATCTCCATGATCTTCCTTGGCCACCTCGGAGAACTCGCTCTCGCAGGTGGCTCCTTAGCCATCGGATTCGCCAACATCACTGGCTACTCTGTTCTCTCTGGCCTCGCCATGGGAATGGAACCCATCTGCGGTCAGGCCTTCGGAGCCAAAAGGTTCAAACTTCTCGGCCTCACCATGCAGAGAACCGTGCTCCTTCTTCTCCTAACTTCACTTTTCATCTCATTCTTCTGGCTCAACATCAAGAAACTATTACTCCTATGTGGCCAAGAAGAAGACATAGCCAATGAGGCACAATTCTATATATATTACTCTCTCCCAGATCTTATATTACAATCGCTGCTGCACCCTCTAAGAATCTATCTTCGTAGCCAATCAATAACTCTTCCTCTCACGTGCTGCGCCGCTCTCTCCATTATCCTCCACGTGCCCATCAACTACCTTTTTGTCTCCGTCCTCAACCTCGGAATCGGAGGCATCGCGTTAAGCGCCGTGATCACAAATTTCAACCTCGTCGCGTCGTTGATTATTTACGTTGTGGTATCAGGCACGCACAAGAAAACGTGGCCGGGTATTTCCAGGTCGTGCTTCAAGGGGTGGAAAAGGCTCTTGAATCTCGCAATTCCGAGTTGCGTGTCGGTTTGTCTGGAATGGTGGTGGTACGAGATAATGATTTTACTGTGCGGATTGTTAGTGAACCCTCATGCAAGTGTTGCCTCCATGGGGGTTTTGATTCAAACCACGGCTTTGATATACATTTTTCCGTCGTCTTTAAGTTTTGGAGTGTCGACGCGTGTTGGAAACGAGTTGGGTGCGGGGAATCCTGTGAGGGCGAAAATTGCGGCGCTGGTGGGACTCTGTTTCAGTTTCGTGTTGGGGTTCTCTGCTTTGGCGTTCGCGATCTCGGTGAGGAAGGTTTGGGCGACGATGTTCACGGGGGACGGAGAAATCCTTGCTTTGACGTCGATGGTGTTGCCTATCATTGGGCTTTGCGAGCTAGGGAACTGTCCCCAGACGACTGTTTGCGGTGTTTTGAGGGGGACGGCGAGGCCGAAATTGGGGGCGAACATAAACTTAGGTTGCTTCTACCTAGTGGGCATGCCCGTTGCGGTGTGGTTGGGGTTCTTTGCAGGGTTTGACTTCAAAGGGCTGTGGCTGGGGATGTTGGCGGCGCAGGGATCTTGTATGATCACAATGATGTTCGTGTTGGCCCGGACCAATTGGGAGGGTCAAGCTTTGAGAGCTAAGGAACTCACTTCATGTGATTCTAACGAGGAGAAAAAACTGGTCGAGGAGGAAGAAGAGAAAGATGTTGAGGAAGCTTTTCTGGGATCCTCTCAGTTACTTGTTTGA 1611 0.4941 MHQLSPTSTFCERNEGHPKISNPQLQVETNMCTSLIPKSPTSCQQHHHQTQNPNKTHFSLALLQAKCISNISFSMILTGLLLYSRSMISMIFLGHLGELALAGGSLAIGFANITGYSVLSGLAMGMEPICGQAFGAKRFKLLGLTMQRTVLLLLLTSLFISFFWLNIKKLLLLCGQEEDIANEAQFYIYYSLPDLILQSLLHPLRIYLRSQSITLPLTCCAALSIILHVPINYLFVSVLNLGIGGIALSAVITNFNLVASLIIYVVVSGTHKKTWPGISRSCFKGWKRLLNLAIPSCVSVCLEWWWYEIMILLCGLLVNPHASVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAGNPVRAKIAALVGLCFSFVLGFSALAFAISVRKVWATMFTGDGEILALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLGFFAGFDFKGLWLGMLAAQGSCMITMMFVLARTNWEGQALRAKELTSCDSNEEKKLVEEEEEKDVEEAFLGSSQLLV* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1467 536 MobiDBLite consensus disorder prediction 1 22 - -
Vra7g1467 536 TIGRFAM matE: MATE efflux family protein 76 471 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra7g1467 536 PANTHER MULTIDRUG RESISTANCE PROTEIN 43 515 - -
Vra7g1467 536 CDD MATE_eukaryotic 64 498 IPR045069 GO:0042910|GO:1990961
Vra7g1467 536 Pfam MatE 75 234 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra7g1467 536 Pfam MatE 295 458 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra7g1467 536 PANTHER PROTEIN DETOXIFICATION 43 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1467 Vra-Chr7 31973526 31975894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1467 K03327 - gmx:100778250 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1467 7 31973526 31975894 Vra7g1467 7 31973526 31975894 ECH