Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1463 ATGGCTCTTTCCTGCTCCACCTTCATTTTTGCTGCTCTTTCTTCCATTCTTTTCTCAGCTCCACTCTCTGCTTCCCAAAAAGTTCCCAACTACACATTTATGCGCAATGCAACGGTGGCACCAGACATCTCATACTACGACTACATCGTAATTGGCGGCGGCACAGCAGGTTGTCCTCTTGCTGCCACACTGTCCCAGAATTACAGCGTGTTGCTCCTTGAACGCGGTGGCTCACCCTACGGGAACCCCAACATCACCAACTTAGCAGCCTTCGGTGCTGCCCTCTCCGACACCTCCCCCACCTCTCCCGCTCAGCGTTTCATCTCCGAAGACGGCGTCATCAACTCAAGAGCTCGCGTCCTCGGCGGCGGAAGCTGCTTGAACGCTGGCTTTTACACTCGCGCCAGCCCTCAATATGCAAGGGAAGCGGGGTGGGATGGAAGGGCTGTGAATGAGTCGTACGAATGGGTGGAGAAGGTAGTTGCGTTTGAGCCAGAAGTGAAGCAGTGGCAGTCAGCTGTTCGGGAAGGGCTACTTGAGATAGGTGTTGTGCCTAATAATGGCTTCAGTTATGATCACATTGGTGGGACTAAGGTAGGAGGCACCATCTTTGACCACCAAGGCTTCAGACACACCGCTGCTGATCTTTTGCAGTATGCCAACCCCTCTGCAATTACCCTCCTTCTCCATGCCACCGTCCATAGGATCCTCTTTAGAGTCAAAGATGGATCTAAACCAATGGCGCATGGTGTGGTGTTCAGAGATTCATTGGGTCGTAAACACAAGGCGTACCTCAATCGTCATCCCAAGAGCGAGATCATTCTTTCGGCTGGTGCGCTTGGAAGCCCACAACTTCTCATGTTGAGTGGAGTTGGGCCCAGACAACACCTTCGGGCCCATAACATCAGTGTAACATTTGACCAGCCTTTGGTGGGTCAGGGAATGTCAGATAACCCCATGAACGCCATCTTCGTCCCATCCCCTCAACCGGTGGAGATATCTCTCATTGAGGTGGTGGGCATCACAAGTTTTGGCAGTTACATTGAAGCTGCCAGTGGTGAAAACTTCGCCGGTGGTTCCCCTAGGGACTACGGAATGTTCTCCCCTAAGATTGGTCAACTGTCGAGGGTGCCGCCAAAAGAAAGGACCCCAGAGGCCATTGCTAAGGCAACGGAAGCGATGCAGGGTCTGGACCAAGCAGCCTTCAGAGGAGGGTTCATCCTGGAGAAGATAATGGGTCCGATTTCAAGCGGGCATTTGGAGCTCCGAACCCGCGATCCAAACGAGAACCCGTCGGTGACCTTCAACTACTTCCAGGATCCCGTAGACTTGGAGAGATGCGTGCAGGGCCTTAGCACGGTGGAGAAGATAATCGAATCCAAGGCATTCGCTCCGTTCAGATATCCCAACATGCCACTCGCGATGCTTTTGAACATGACTGCAAATAGCCCCGTTAACTTGCTTCCCAAACACACCAACTCCTCCCTCTCTCTCCAACAGTTCTGCAGAGACACGGTGATGACCATTTGGCACTACCACGGAGGCTGCCAAGTTGGAAAAGTCGTGGACAGGGACTACAAGGTTCTTGGTGTCGATGCACTTCGCGTTATCGATGGTTCCACCTTTAACTACTCTCCTGGGACTAATCCTCAGGCCACTGTTATGATGCTTGGCAGGTATATGGGAGTTCAAATACTCACTCAGAGACTTCCTCCCACTGCTGCCTATCAAACACAACAATAA 1743 0.5227 MALSCSTFIFAALSSILFSAPLSASQKVPNYTFMRNATVAPDISYYDYIVIGGGTAGCPLAATLSQNYSVLLLERGGSPYGNPNITNLAAFGAALSDTSPTSPAQRFISEDGVINSRARVLGGGSCLNAGFYTRASPQYAREAGWDGRAVNESYEWVEKVVAFEPEVKQWQSAVREGLLEIGVVPNNGFSYDHIGGTKVGGTIFDHQGFRHTAADLLQYANPSAITLLLHATVHRILFRVKDGSKPMAHGVVFRDSLGRKHKAYLNRHPKSEIILSAGALGSPQLLMLSGVGPRQHLRAHNISVTFDQPLVGQGMSDNPMNAIFVPSPQPVEISLIEVVGITSFGSYIEAASGENFAGGSPRDYGMFSPKIGQLSRVPPKERTPEAIAKATEAMQGLDQAAFRGGFILEKIMGPISSGHLELRTRDPNENPSVTFNYFQDPVDLERCVQGLSTVEKIIESKAFAPFRYPNMPLAMLLNMTANSPVNLLPKHTNSSLSLQQFCRDTVMTIWHYHGGCQVGKVVDRDYKVLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGVQILTQRLPPTAAYQTQQ* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1463 580 SUPERFAMILY FAD-linked reductases, C-terminal domain 315 515 - -
Vra7g1463 580 ProSitePatterns GMC oxidoreductases signature 2. 278 292 IPR000172 GO:0016614|GO:0050660
Vra7g1463 580 Pfam GMC oxidoreductase 46 319 IPR000172 GO:0016614|GO:0050660
Vra7g1463 580 PANTHER OSJNBA0019K04.7 PROTEIN 12 570 - -
Vra7g1463 580 Gene3D - 46 558 IPR036188 -
Vra7g1463 580 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Vra7g1463 580 Gene3D - 163 508 - -
Vra7g1463 580 PIRSF Alcohol_oxidase 22 572 IPR012132 GO:0050660
Vra7g1463 580 SUPERFAMILY FAD/NAD(P)-binding domain 45 568 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1463 Vra-Chr7 31913806 31918254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1463 15 569 Miscellaneous Gene Families AT5G51950 57.829 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1463 - - gmx:100780028 1014.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1463 7 31913806 31918254 Vra7g1463 7 31913806 31918254 ECH