Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1420 ATGGAGTGGCAACCATGTACGGATGAGTACGAGAAGCTCGTAATTCGCATGAGCACTCCCAGGGTTGTCATAGATAATGCCGTCTGCTCCACCGCAACAATAGTCAAGGTTGATAGCGGCAGAAAACATGGGATTCTTTTGGATGCCGTACAAGTGCTTTCTGATCTAAACCTTTCAATTAAGAAGGCTTACATTTCCTCTGATGGGAGATGGTTCATGGATGTTTTTCATGTTACTGATCAAAACGGAAACAAGCTAACCGATCAGAGCGTTTTGAATTATATTGAACAGTCGCTTGGCGGAATTCACAATGGGAGTGCCAATGTCTTAAACGGTCTCACTACCCTTGAATTAACGGGCACAGACCGCGTTGGTCTTCTTTCGGAGGTGTTTGCTGTACTAGCTGAGCAGCAATGTGATGTGGTTAATGCTAAGGTTTGGACTCACAATGGTCGAATTGCCTCTTTAATCTATGTGAAAGACAGCAGTTCTGGGACTCTTATCGAGGACTCTCTGAGAATTAAAACTATTGAAGCACGTTTAAGAAATGTTCTAAAGGGTGACAATGATATTAGGAGTGCGAAAACTTCCTTCACCAACGCCGTTGTGCACACAGAAAGAAGGCTGCACCAGATGATGTACGCTGATCGTGATTACCAAAGGAATCCCATTTTCAAGTTTACTTCTGATATCCCAGTAGTCACCGTTCAAAATTGGGCCGAAAGGGGTTATTCGGTTGTCAATGTGCAGTGCAAGGATCGAATTAAACTTTTGTTTGATGTGGTCTGTAATTTGACTGATATGGAATATGTTGTGTTCCATGGAACTGCCAAGACAACAGTTGACCAAGCGTATCTGGAGTTTTATATAAGACACAAGGATGGCACTCCAATTAGTTCAGAACCAGAACGTCATCGTGTGATTCAATGCTTGCAAGCTGCTGTGGAGAGAAGGGCATTTGAGGGTGTTATGCTAGAGTTATGTACGGAGGATAGACAGGGGCTTCTAGCAGAAGTGATGAGAACTTTTCGAGAGAATGGACTTAATGTGACAAGGGCGGAGATATCTACCATTGGGGACAGGACATCAAATGTGTTTTATGTAACAGATGCGATCGGATACCCTGCGGATCCAAAATTGATCGAATCTGTTAGGCAGAAAGTTGGATTGAGCCATTTAAAAGTGAAGGAGTTAGCATTGGTATGCCACGAGAAGGCAGAAAGGGAAGATGAAGCAGTTGGGGTTGGTGGGGCAGTGTTGCTGTGTCTGGGGAGCCTCGTGAGAAGGAATCTATACAATTTGGGTTTGATAAAATCATGCTCTTAA 1326 0.4367 MEWQPCTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSGRKHGILLDAVQVLSDLNLSIKKAYISSDGRWFMDVFHVTDQNGNKLTDQSVLNYIEQSLGGIHNGSANVLNGLTTLELTGTDRVGLLSEVFAVLAEQQCDVVNAKVWTHNGRIASLIYVKDSSSGTLIEDSLRIKTIEARLRNVLKGDNDIRSAKTSFTNAVVHTERRLHQMMYADRDYQRNPIFKFTSDIPVVTVQNWAERGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHGTAKTTVDQAYLEFYIRHKDGTPISSEPERHRVIQCLQAAVERRAFEGVMLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIGDRTSNVFYVTDAIGYPADPKLIESVRQKVGLSHLKVKELALVCHEKAEREDEAVGVGGAVLLCLGSLVRRNLYNLGLIKSCS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1420 441 SUPERFAMILY ACT-like 111 185 IPR045865 -
Vra7g1420 441 CDD ACT_ACR_3 244 318 - -
Vra7g1420 441 Pfam ACT domain 114 164 IPR002912 -
Vra7g1420 441 Pfam ACT domain 324 375 IPR002912 -
Vra7g1420 441 CDD ACT_ACR_1 32 100 - -
Vra7g1420 441 ProSiteProfiles ACT domain profile. 115 196 IPR002912 -
Vra7g1420 441 SUPERFAMILY ACT-like 29 100 IPR045865 -
Vra7g1420 441 Gene3D - 113 187 - -
Vra7g1420 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Vra7g1420 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Vra7g1420 441 Gene3D - 321 396 - -
Vra7g1420 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Vra7g1420 441 SUPERFAMILY ACT-like 322 386 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1420 Vra-Chr7 31453951 31457215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1420 - - gmx:100794729 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1242 4 19411119 19414092 Vra7g1420 7 31453951 31457215 ECH
Vra7g1420 7 31453951 31457215 Vra7g1420 7 31453951 31457215 ECH