Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1405 ATGTCTTCTTCTACAGCTTTCTTCTTCTTTCTCGTCAACGTCTCCTTACTTTTCATCCTCTCTTCCGCTGCGGATCCATTTGTTTCCTACAATTTTGAGGTCTCTTACATCACTGCCTCTCCACTTGGAGTTCCTCAGCAGGTCATTGCTATCAACAACAAATTCCCTGGTCCTACTATCAATGTGACCACAAACAACAATGTTGCCGTCAATGTTCGGAACAAATTGGATGAGAGCCTCCTCATTCATTGGTCTGGGATTCAGCAGAGGAGGAGTTCGTGGCAAGATGGTGTTCTTGGCACGAATTGTCCCATTCCTTCTAAGTGGAACTGGACTTACCAGTTTCAGGTCAAGGATCAAATTGGAAGCTTTTTCTACTTCCCTTCCCTTCATCTTCAGAGGGCTGCTGGTGGATTTGGGGGTTTCATTATAAACAACCGACCCATCATTCCTATTCCTTTTGATACCCCATATGGGGACATTGTCGTTTTTATTGGAGATTGGTACACCCGCAACCATACGGACATGAGGAAGGCCCTAGACGATGGAAAAGATCTTGGCATGCCGGATGGTGTTCTCATCAATGGGAAAGGCCCATACCGATATAACGATACACTTGTTCCTGATGGCATCGATTATGAAACAATTGAAGTCCATCCTGGAAAAACTTACCGACTTCGTGTACATAATGTTGGAGTGTCAACAAGTCTGAATTTCAGGATCCAGAGTCATAACTTACTTCTAGCAGAGACAGAGGGGTCTTACACAGTGCAACAGAACTACACTAGCTTAGATATTCATGTTGGGCAATCTTATTCTTTTCTGGTAACCATGGACCAAAATGCAAGTTCAGATTACTACATTGTAGCGAGTGCCAGGTTTGTGAATGAATCACGTTGGCAAAAAGTTACTGGAGTTGCTATCTTGCGCTATACAAATTCCAAGGGGAAGGCGCATGGTCCTCTTCCACCGGCTCCTGATGATCAATTTGACAAAACTTACTCAATGAACCAAGCAAGATCCATCAGATGGAATGTATCAGCAAGTGGTGCTCGTCCTAACCCACAAGGGTCTTTCAGATATGGTTCCATCAATGTGACTGAGATTTATGTATTAAAAAATAAGCTACCTGAGAAAATTAATGGGAAGAGGCGAGCAACTGTCAGTGGAATATCTTTTGTCAATCCTTCGACTCCAATCAGGCTTGCTGACCAGTACAAATTGAAGGGAGTATACAATCTAAATTTTCCCACCAAGCCTATTACTGGACCACCTCGTGCAGAAACATCAATCATTAATGGAACCTATAGAGGATTTATGGAAGTTATATTGCAGAACAATGATACCAAGATGCATACCTATCACATGAGTGGATATGCATTTTTTGTAGTCGGGATGGATTATGGTGATTGGTCTGAGAATAGCAGGGGCACATATAACAAGTGGGATGGAATAGCTCGCACTACAGCTCAGGTTTACCCTGGAGCATGGACTGCAATTTTGGTTTCCCTTGACAACGTAGGAGTATGGAATCTCAGAACAGAAAACCTTGATTCATGGTACCTTGGTCAGGAAACATATGTCAGGGTTGTCAACCCAGAGGTTACCAACAAGACTGAGCTGCCCATTCCAGATAATGCCCTCTTCTGTGGTGCCTTAAGTAAATTGCAGAAGCCTCAAGATATTTCTTCTGCGGCATCACCAATCAATGGGAATACGCTGAAGCTGTTTTTCACCTGGCTGATTGTATCCGCCTGGATCCATATATTCCAGTAA 1776 0.433 MSSSTAFFFFLVNVSLLFILSSAADPFVSYNFEVSYITASPLGVPQQVIAINNKFPGPTINVTTNNNVAVNVRNKLDESLLIHWSGIQQRRSSWQDGVLGTNCPIPSKWNWTYQFQVKDQIGSFFYFPSLHLQRAAGGFGGFIINNRPIIPIPFDTPYGDIVVFIGDWYTRNHTDMRKALDDGKDLGMPDGVLINGKGPYRYNDTLVPDGIDYETIEVHPGKTYRLRVHNVGVSTSLNFRIQSHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNESRWQKVTGVAILRYTNSKGKAHGPLPPAPDDQFDKTYSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLKNKLPEKINGKRRATVSGISFVNPSTPIRLADQYKLKGVYNLNFPTKPITGPPRAETSIINGTYRGFMEVILQNNDTKMHTYHMSGYAFFVVGMDYGDWSENSRGTYNKWDGIARTTAQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRVVNPEVTNKTELPIPDNALFCGALSKLQKPQDISSAASPINGNTLKLFFTWLIVSAWIHIFQ* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1405 591 Pfam Multicopper oxidase 161 313 IPR001117 -
Vra7g1405 591 SUPERFAMILY Cupredoxins 376 551 IPR008972 -
Vra7g1405 591 SUPERFAMILY Cupredoxins 23 174 IPR008972 -
Vra7g1405 591 Gene3D - 21 146 IPR008972 -
Vra7g1405 591 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 12 562 - -
Vra7g1405 591 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Vra7g1405 591 Gene3D - 158 351 IPR008972 -
Vra7g1405 591 SUPERFAMILY Cupredoxins 156 353 IPR008972 -
Vra7g1405 591 PANTHER MULTI-COPPER OXIDASE 12 562 IPR045087 -
Vra7g1405 591 Pfam Multicopper oxidase 402 533 IPR011706 GO:0005507|GO:0016491
Vra7g1405 591 Gene3D - 363 561 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1405 Vra-Chr7 31228888 31233335 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1405 - - gmx:100788318 1089.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1405 7 31228888 31233335 Vra7g1405 7 31228888 31233335 ECH