Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1404 ATGGAACATCATAAACCCTTGTTACCTACTTCCTCTCACGCCGCTCCAACCTCAACCACTCGCAAGGACCTCCTTTTCGTCGTTTGCGCCTTGCTCTTCCTCTCTTCCCTCGTCGCCTATGAGGGTTACAGGGCCTCCGCCGTGCCTAATCTTCACGTTTCATCACCTACGTCCAACAATCAACAAGATCACCAAAGTCCCACATCGCTGCCTTCTTCCAAATGGTACCCTGTTTCAAGGGGTGTTTCATCCGGGGTGTCGGAGAAGTCATCGAACTTGTTATTCGCCGGTGAAGGAGGAGCTTCCGAAGCATTTCCTTGGGACAATAGCATGTTGTCTTGGCAGAGAACTTCTTTTCATTTCCAGCCAGAGAAAAACTGGATGAACGATCCTAATGGTCCTATGTACTACAAGGGATGGTATCACTTTTTCTACCAATACAATCCGAATGGTGCAGTTTGGGGTGACATAGTTTGGGGACACGCGGTGTCAAGGGACATGATCCATTGGCTTCACCTTCCATTGGCAATGGTGGCTGATCAATGGTATGACAAGCAAGGCGTGTGGACAGGCTCAGCTACCATCTTACCAAATGGTGAAATCATCATGTTATACACAGGTTCCACCAATGAGTCAGTGCAAGTTCAAAACCTCGCATACCCTGCTGACCCCTCTGACCCTCTGCTTCTGGATTGGATCAAACACACCGGGAACCCGGTTTTGGTCCCACCACCAGGCATTGGTGCCAAGGACTTTCGTGACCCTACGACTGCATGGCTCACCTCTGAAGGAAAGTGGCGCATAACCATAGGATCCAAGCTTAATAAAACTGGCATTGCTTTGGTTTATGACACTGAGGACTTCAAGACCTATGAGCTTAAGGAAGGGCTGCTTCGAGCTGTCCCTGGCACTGGCATGTGGGAGTGTGTCGACTTCTTCCCCGTGTCCAAGAAAAATGGAAATGGATTGGATACCTCTGTTAATGGGGCTGAGGTCAAGCATGTCATGAAGGTCAGCTTGGATGATGATAGACATGATTACTACGCCATAGGGACTTACGATGATAACAAAGTTCTGTTCACACCAGATGATGTTAAGAATGATGTTGGTGTTGGTTTAAGGTATGACTATGGAATATTCTATGCATCCAAGACATTTTATGATCAGAACAAGGATAGGAGAATTTTGTGGGGTTGGATTGGAGAATCTGACAGTGAATATGCAGATGTTACCAAAGGTTGGGCTTCAGTTCAGAGTATTCCAAGAACTGTGAGGCTTGATACGAAGACTGGCAGCAACTTACTTCAGTGGCCTGTTGATGAAGTGGAGAGTTTGAGATTGAGAAGTGATGAATTCAAAAGTTTGAAGGCAAAACCAGGGTCAGTGGTGTCACTAGATATTGAAACAGCCACACAGTTGGACGTTGTTGCGGAGTTTGAGATAGACACGGAATCCCTAGAGAAAACAGCTGAATCCAATGAGGAGTTCACATGCAGCAGCAGCGGTGGAGCTGCACAACGTGGTGCCTTGGGACCTTTTGGTCTTCTGGTTTTGGCTGATGAGGGGCTTTCTGAGTATACTCCTGTGTATTTCTATGTCATTAAAGGAAGAAATGGAAATCTTAGGACTTCCTTTTGCTCTGATCAATCAAGGTCTTCTCAGGCAAATGACGTTCGCAAGCAAATCTTTGGGAGTGTTGTTCCAGTACTTAAAGGGGAAAAGTTTTCCTTACGGATGCTGGTGGACCATTCTATTGTTGAAAGCTTTGCTCAAGGTGGAAGAACGTGTGTAACATCTCGGGTTTATCCAACAAAGGCAATCTATGGAGCTGCTAGATTGTTCTTGTTCAACAATGCTACTGAGGCCACTGTGACAGCCTCACTCAAAGTTTGGCAAATGAATTCTGCATTTATACGCCCATTCCCATTCAACCCAGATCAGAAGAGCTAA 1950 0.4631 MEHHKPLLPTSSHAAPTSTTRKDLLFVVCALLFLSSLVAYEGYRASAVPNLHVSSPTSNNQQDHQSPTSLPSSKWYPVSRGVSSGVSEKSSNLLFAGEGGASEAFPWDNSMLSWQRTSFHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQWYDKQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLLDWIKHTGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTEDFKTYELKEGLLRAVPGTGMWECVDFFPVSKKNGNGLDTSVNGAEVKHVMKVSLDDDRHDYYAIGTYDDNKVLFTPDDVKNDVGVGLRYDYGIFYASKTFYDQNKDRRILWGWIGESDSEYADVTKGWASVQSIPRTVRLDTKTGSNLLQWPVDEVESLRLRSDEFKSLKAKPGSVVSLDIETATQLDVVAEFEIDTESLEKTAESNEEFTCSSSGGAAQRGALGPFGLLVLADEGLSEYTPVYFYVIKGRNGNLRTSFCSDQSRSSQANDVRKQIFGSVVPVLKGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVTASLKVWQMNSAFIRPFPFNPDQKS* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1404 649 SUPERFAMILY Arabinanase/levansucrase/invertase 113 439 IPR023296 -
Vra7g1404 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 438 637 IPR013320 -
Vra7g1404 649 Gene3D - 450 633 - -
Vra7g1404 649 Pfam Beta-fructofuranosidase, N-terminal domain 4 112 IPR021792 GO:0004564
Vra7g1404 649 Gene3D Glycosyl hydrolase domain; family 43 124 449 IPR023296 -
Vra7g1404 649 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 14 641 - -
Vra7g1404 649 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 14 641 - -
Vra7g1404 649 MobiDBLite consensus disorder prediction 54 75 - -
Vra7g1404 649 Pfam Glycosyl hydrolases family 32 N-terminal domain 120 438 IPR013148 -
Vra7g1404 649 SMART glyco_32 120 593 IPR001362 GO:0004553|GO:0005975
Vra7g1404 649 Pfam Glycosyl hydrolases family 32 C terminal 441 632 IPR013189 -
Vra7g1404 649 CDD GH32_Fruct1-like 126 426 - -
Vra7g1404 649 ProSitePatterns Glycosyl hydrolases family 32 active site. 120 133 IPR018053 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1404 Vra-Chr7 31211794 31215900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1404 22 641 Glycoside Hydrolase AT1G12240 66.193 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1404 K01193 - gmx:100788844 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1404 7 31211794 31215900 Vra7g1404 7 31211794 31215900 ECH