Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1400 ATGCGTGTCAAGGAAATGCACCCCTTGTGCTGCATCTCGCTGGAAAGTCCGGGGATCGGGAGCGACTCTCCGGAGCCCGAGGCTGCCGCGTTATCCAGGACCAGGAGTCTCCCGGCCGGTGGATCTGACGGCATTGCACGGAGGGGATCCGAGGACACGGTGGCCGGAGTTCTCTACAAGTGGACCAATTACGGCAAGGGATGGAGATCCCGCTGGTTCCTCCTCCGCAATGGTGTCCTCTCTTATGCCAAGATCTGCTGGCCGGAAAACCTCAACCTCCTCTCTCCAGTGGATGAGGTGCGTCTCATCGGAGAAGTCACCGCCAACCGACTTGCCAGAGATGCTGCTACCATAAGGCGGAAGAGTCACAAACCTCCTTCCTCTTCTGCCGTAGTGCATCTCAAGATCTCGTCATTCAGAGAGAGCAAGTCGGACGATAGACGGTTCTATATATTCACAGCAACAAAAACTCTCCATCTGAGAACTGATTCAAGGAAGGACCGTGTGGCGTGGATTCAAGCTTTGGTTTCAACCCGAGAATTATATCCACTTCGACCACTCAGCGACCATCTGTCCCTCGCACCGAATCATATATCTGTATCAACCGAAAGGCTTAAGAAACGCTTACTTGAAGAGGGTAGCAGTGAGAGCCTTGTCAAAGAGTGCGAGCAAATCATGTTTGCCGAGTTCTCTGAATTACAAGAGCAACTTCATATACTATGTCAAGAGCGAAGGAATTTGCTTGATACAATAAGGCAGCTGGAGGCTGCTAATATTGAACCTGAGGCCTCTGCCTTGCACGACAGTGAATACCAATTAACGAAGAATGGCTTTTCAAGTTTAGGACATGGAAAATATAGCGAATGCAGTACTACTGAATCATCGGATGATATTGAGAAACAGGAGATGGAGGAAGTGTCAGATGAAGATGAAATCTCATATTATGACACTAAAGAGTACTTTACAGAACTTGGTTTTAGGTGTGGGTCCACAGGAGCTTTGGATCCAATGAGCATGTCTGGGGAAGCTAACACACAGTCCATTGATTTGGAGAACAATCACGTTGGGGAGACGGTCAATGGTTTTGGGTACCCTCAGATAGCAAGGCGAAAGAAGCTTCCAGATCCTGTTGAGAAGGAAAAGGGCGTTAGTCTTTGGTCAATTATCAAAGACAACGTGGGCAAAGATCTCACACGAGTGTGTCTTCCTGTATACTTTAATGAGCCAATTTCATCTCTTCAGAAATGTTTTGAGGACTTGGAGTACTCCTTTCTTCTCGATAGAGCTTATGAGTACGGGAAAGCGGGAAACGGTCTCCTTCGGGCCCTGAATGTTGCTGCCTTTGCTGTTTCTGGATATGCATCATCCGAAGGTCGTCATTGTAAACCCTTTAATCCGTTGTTAGGGGAAACTTATGAAGCGGATTATCCTGACAAAGGAGTTCGTTTCTTTTCCGAGAAGGTGAGTCACCATCCAACTGTCGTTGCCTGCCACTGTCAAGGTAGAGGATGGAAGTTTTGGGCTGACAGTAACATTCGGTCAAAATTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGTGTTCTGACCCTGGAGTTTGATGACGGTGAAATATTTCAGTGGAGCAAGGTCACGACAACAATTTATAATCTTATCCTTGGGAAAATATATTGCGATCATCATGGAAACATGGACATCCGTGGTAATCGCCAATATTCGTGCAGACTTAAGTTCAAAGAACAGACGATTCTTGATCGAAATCCCCACCAGGTGCATGGCTTTGTTGAAGATGTAACGGGAAAAAAGGTTGCCACATTGTTTGGCAAGTGGGATGACAGCATGTATTATGTTAATGGTGAAGCGAATGTGAAACCGAAAGATTGCACTTTGTCAGACGCAAATTTGTTGTGGAAAAGAACTAAGCCACCTTCTAATCTCACCCGGTACAATCTGACATCATTTGCAATCACACTGAATGAGCTTACTCCTGGGCTAAAGGAGAAGCTTCCACCCACGGATTCCAGGCTGAGACCAGATCAGCGGCATCTAGAGGATGGGGAATACGAGAAGGCTAATATCGAAAAACAAAGGTTGGAAAAGAGGCAAAGAATGTCAAGGAAAATGCAAGAAAATGGATGGCAACCTAGGTGGTTTCGCAGAGAAGGTGAAAACGGAACGTTTCGATATATAGGCGGGTATTGGGAAGCGAGAGCTCTAGGAAGATGGAATGGATGCCCAAATATCTTCGGTGAAGTTTATGAAGGAAATTTTGATCCTTTAGGTGCATCTTGA 2292 0.4651 MRVKEMHPLCCISLESPGIGSDSPEPEAAALSRTRSLPAGGSDGIARRGSEDTVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKICWPENLNLLSPVDEVRLIGEVTANRLARDAATIRRKSHKPPSSSAVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSTRELYPLRPLSDHLSLAPNHISVSTERLKKRLLEEGSSESLVKECEQIMFAEFSELQEQLHILCQERRNLLDTIRQLEAANIEPEASALHDSEYQLTKNGFSSLGHGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTKEYFTELGFRCGSTGALDPMSMSGEANTQSIDLENNHVGETVNGFGYPQIARRKKLPDPVEKEKGVSLWSIIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSFLLDRAYEYGKAGNGLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPDKGVRFFSEKVSHHPTVVACHCQGRGWKFWADSNIRSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSCRLKFKEQTILDRNPHQVHGFVEDVTGKKVATLFGKWDDSMYYVNGEANVKPKDCTLSDANLLWKRTKPPSNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLEDGEYEKANIEKQRLEKRQRMSRKMQENGWQPRWFRREGENGTFRYIGGYWEARALGRWNGCPNIFGEVYEGNFDPLGAS* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1400 763 Pfam Oxysterol-binding protein 384 737 IPR000648 GO:0008289
Vra7g1400 763 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 754 - -
Vra7g1400 763 Gene3D - 470 642 - -
Vra7g1400 763 Gene3D - 48 181 IPR011993 -
Vra7g1400 763 ProSiteProfiles PH domain profile. 51 180 IPR001849 -
Vra7g1400 763 MobiDBLite consensus disorder prediction 15 45 - -
Vra7g1400 763 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 754 IPR000648 GO:0008289
Vra7g1400 763 SUPERFAMILY Oxysterol-binding protein-like 379 757 IPR037239 -
Vra7g1400 763 SUPERFAMILY PH domain-like 52 177 - -
Vra7g1400 763 Coils Coil 237 257 - -
Vra7g1400 763 Pfam Pleckstrin homology domain 56 175 - -
Vra7g1400 763 Gene3D - 680 735 - -
Vra7g1400 763 SMART PH_update 52 182 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1400 Vra-Chr7 31142743 31153193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1400 K20456 - gmx:100793692 1454.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1400 7 31142743 31153193 Vra7g1400 7 31142743 31153193 ECH