Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1399 ATGAACAGTCCCTCTGAAACACAGAAGAAAACCGTCATAGATGCCTGGGACTACAGAGGTCATCCAGCTCAGAGGTCCAAAACTGGTGGTTGGGTTGCTGCCGCCATGATTTTAGGAGTGGAAGCAAGTGAGAGGTTAACGACAATGGGCGTTGCCGTGAATCTGGTGACATATTTAACTGGTACCATGCATTTGGGCAGTGCTAATTCTGCCAACACGGTCACCAACTTCATGGGAACCTCTTTCATGCTCTGTTTATTCGGTGGTTTTGTAGCTGACACTTTTATCGGCAGATACCTCACTATTGCCATCTTCGCAGCGGTTCAAGCAACTGGTGTTACAATATTGACAATATCAACCATAGTCCCAAGCCTGCATCCTGCAAAATGTGTAAGATCTGCTACGAGACGTTGCGAGCCCGCAAGCAACATGCAGCTATTGGTGCTCTACCTAGCTCTTTACACCACATCCCTTGGCATTGGTGGGTTGAAATCCAGTGTGTCAGGGTTTGGCACGGATCAGTTCGATGAATCAGACAAAGGGGAGAAAAATCAGATGATAAAATTCTTCAACTGGTTCGTGTTCTTCATAAGTTTGGGGACTCTGACAGCAGTTACCGTTCTGGTGTACATTCAAGATCACATAGGGAGGTATTGGGGTTATGGGATAAGTGTGTGTGCTATTCTGGTGGCACTTACGGTGTTCTTGTCTGGTACAAGGAGGTACCGGTTCAAGAAACTGGTGGGGAGTCCCCTGACGCAGATTGCCATGGTGTTGGTGGCAGCTTGGAGGAAGAGGCACATGGAATTACCCTCTGATGCCTCCTTGTTGTTTAACTTGGATGATGTTGCAGATGAAACTCTCAGAAAGCAGAAGCAGATGTTGCCCCATAGCAAACAGTTCAGGTTCTTGGACAAGGCAGCAATCAAGGACCCAAAAACAGATGGCCAAGAAATCACCATGGAGAGGAAGTGGTATCTCTCAACCCTAACAGACGTTGAAGAAGTTAAGATGGTACAGAGAATGCTACCCGTGTGGGCCACCACCATCATGTTTTGGACTATCTACGCCCAAATGACTACGTTCTCGGTATCACAGGCAACCACCATGGACCGGCACATCGGAAACTCCTTTCAAATTCCCGCAGCATCACTCACAGTCTTCTTTGTGGCAAGCATTCTCCTTACAGTCCCCATCTACGACCGCATCATTGCTCCCATAGCCAAAAAAGTAACAAAAAACCCACAGGGACTAACCCCTTTGCAACGCATGGGCGTAGGGTTGGTGTTTTCAATCTTTGCCATGGTGGCTGCAGCACTCACTGAAATAAAGCGGCTGAGAGTGGCAAGTGCCCACGGATTAACACACAAACACAATGCTGTGGTTCCCATCAGCGTCTTCTGGTTGGTCCCACAGTTCTTCTTTGTAGGGTCGGGAGAGGCCTTTACATACATAGGGCAGCTAGATTTTTTCCTGAGGGAGTGTCCAAAGGGGATGAAGACTATGAGTACAGGATTGTTCTTGAGCACGTTGTCTTTAGGGTTTTTTCTTAGTTCCTTGTTGGTGACTTTGGTGCACAAGGCCACGCGTAACAGTGAACCATGGCTTGCGGACAACCTTAATGAGGGGAAACTGCACCACTTCTACTGGTTACTGGCTGTTCTGAGTGGTGTGAATTTGGTGGTGTATTTGTTTTGTGCAAAGGGATATGTTTACAAGGACAAGAGGCTCGCAGAAGCAGGCATAGAGTTGGAGGAAACGGACACTGTTTCTCATGCTTAG 1782 0.4764 MNSPSETQKKTVIDAWDYRGHPAQRSKTGGWVAAAMILGVEASERLTTMGVAVNLVTYLTGTMHLGSANSANTVTNFMGTSFMLCLFGGFVADTFIGRYLTIAIFAAVQATGVTILTISTIVPSLHPAKCVRSATRRCEPASNMQLLVLYLALYTTSLGIGGLKSSVSGFGTDQFDESDKGEKNQMIKFFNWFVFFISLGTLTAVTVLVYIQDHIGRYWGYGISVCAILVALTVFLSGTRRYRFKKLVGSPLTQIAMVLVAAWRKRHMELPSDASLLFNLDDVADETLRKQKQMLPHSKQFRFLDKAAIKDPKTDGQEITMERKWYLSTLTDVEEVKMVQRMLPVWATTIMFWTIYAQMTTFSVSQATTMDRHIGNSFQIPAASLTVFFVASILLTVPIYDRIIAPIAKKVTKNPQGLTPLQRMGVGLVFSIFAMVAAALTEIKRLRVASAHGLTHKHNAVVPISVFWLVPQFFFVGSGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFLSSLLVTLVHKATRNSEPWLADNLNEGKLHHFYWLLAVLSGVNLVVYLFCAKGYVYKDKRLAEAGIELEETDTVSHA* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1399 593 Gene3D MFS general substrate transporter like domains 2 580 IPR036259 -
Vra7g1399 593 PANTHER PROTEIN NRT1/ PTR FAMILY 6.3-LIKE 10 585 - -
Vra7g1399 593 SUPERFAMILY MFS general substrate transporter 19 570 IPR036259 -
Vra7g1399 593 Pfam POT family 99 535 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra7g1399 593 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 585 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra7g1399 593 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1399 Vra-Chr7 31135540 31140072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1399 1 590 Organic Solute Cotransporters AT1G12110 61.083 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1399 - - pvu:PHAVU_003G218500g 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1399 7 31135540 31140072 Vra7g1399 7 31135540 31140072 ECH