Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1398 ATGGAGTCTTCTAGATCTTCAACTCTAGCTCTCTTTTTTACCATCAATTTGCTTTTCTTTGCCATGGCAAGTGGCTGCTTCACTTGCACAAAGCCTAACCCATTCCCTTATCCTAACTCTAACCCTACTCCTGCTGCAAAGAGCTGTCCCAGGGATGCACTTAAGCTGGGTGTGTGCGCTAACGTCCTTAATGGACCTATTGGTGCGGTGGTGGGATCACCACCGGACCACCCATGTTGCTCGGTGCTAGAAGGGCTTCTTGATCTTGAAGTTGCGGTTTGCCTCTGCACTGCCATCAAAGCTAACATACTTGGCATTAACCTTAACATCCCCATTTCACTAAGCTTGATCCTTAACGCCTGTGAGAAGTCGCCACCCTCTGACTTCCAGTGCAGCTAG 399 0.4887 MESSRSSTLALFFTINLLFFAMASGCFTCTKPNPFPYPNSNPTPAAKSCPRDALKLGVCANVLNGPIGAVVGSPPDHPCCSVLEGLLDLEVAVCLCTAIKANILGINLNIPISLSLILNACEKSPPSDFQCS* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1398 132 Pfam Hydrophobic seed protein 49 132 IPR027923 -
Vra7g1398 132 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 6 131 - -
Vra7g1398 132 SMART aai_6 49 131 IPR016140 -
Vra7g1398 132 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vra7g1398 132 CDD HPS_like 48 131 IPR027923 -
Vra7g1398 132 PANTHER - 6 131 - -
Vra7g1398 132 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 51 131 IPR036312 -
Vra7g1398 132 Gene3D - 46 132 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1398 Vra-Chr7 31114382 31115110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1398 40 131 Acyl Lipid Metabolism Gene Families AT4G22490 39.362 6.31e-13 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1398 - - var:108336118 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1398 7 31114382 31115110 Vra7g1398 7 31114382 31115110 ECH