Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1396 ATGGCTTCAAAAACTCCTTCTTCCCTTGTTGTTCTTTTCCTCACACTCAACATCCTCTTCTTTGCCATTGCCTCTGCCACTAAGCCAAGGCACGGAGGTTACGGTGGTTCCGGAGGTTCAGGTGGCTCGGGTGGTTCAGGAGGCAATGGAGGCTCTGGTGCCTCATGCCCTCGTGATGCACTCAAACTAGGAGTGTGTGCCAATGTTCTAAACGGGTTGCTGAACGTGACACTGGGTCAACCACCAGTTACCCCTTGCTGCAGCCTCCTCGATGGTCTCCTTGACCTTGAAGCTGCAGCGTGCCTCTGCACTGCCCTCAGAGCAAACATCTTAGGCATCAACCTCAACCTTCCCATCTCACTCTCCCTCCTTCTCAACGTTTGCTCAAGGCAGGTTCCCCGTGATTTCCAATGTGCCTGA 420 0.5357 MASKTPSSLVVLFLTLNILFFAIASATKPRHGGYGGSGGSGGSGGSGGNGGSGASCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCSLLDGLLDLEAAACLCTALRANILGINLNLPISLSLLLNVCSRQVPRDFQCA* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1396 139 Pfam Hydrophobic seed protein 56 139 IPR027923 -
Vra7g1396 139 PANTHER HYPRP2 7 138 - -
Vra7g1396 139 Gene3D - 54 139 IPR036312 -
Vra7g1396 139 SMART aai_6 56 138 IPR016140 -
Vra7g1396 139 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 58 138 IPR036312 -
Vra7g1396 139 PANTHER - 7 138 - -
Vra7g1396 139 CDD HPS_like 54 138 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1396 Vra-Chr7 31094730 31095493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1396 55 138 Acyl Lipid Metabolism Gene Families AT4G22490 42.857 2.08e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1396 - - gmx:100499716 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1396 7 31094730 31095493 Vra7g1396 7 31094730 31095493 ECH