Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1392 ATGGCTTCGAAGGGTGCTCTTCTCTTGTGTTTGAACATCTTGTTTTTCAGTGTGGTTAGCTGCACATACGTGCCATGCAACCCACCCCCAAAAGCTCCAAAAAAGCCACCACACACACCTGTGCCAAAGCCACCTTCCACAAAGTATGGGAGTTGCCCATTAGACACCGTTAAGTTTGGTGTGTGCGCTGATGTGTTGGGTTTGATCGGCGTGCAGCTTGGGAAGCCACCAAAGACCCCATGCTGCAACCTCATCCAAGGCCTTGCTGATCTTGAAGCTGCCGTCTGCCTTTGCACTGCTCTCAAAGCTAACGTCTTGGGCATCAACCTCAATGTCCCCATCAAGTTGAACTTGCTTCTCAACTACTGTGGAAAGAAAACTCCTAANGATTTCCTCTGCAATTAA 405 0.4889 MASKGALLLCLNILFFSVVSCTYVPCNPPPKAPKKPPHTPVPKPPSTKYGSCPLDTVKFGVCADVLGLIGVQLGKPPKTPCCNLIQGLADLEAAVCLCTALKANVLGINLNVPIKLNLLLNYCGKKTPXDFLCN* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1392 134 Gene3D - 51 134 IPR036312 -
Vra7g1392 134 SMART aai_6 52 133 IPR016140 -
Vra7g1392 134 CDD HPS_like 50 133 IPR027923 -
Vra7g1392 134 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Vra7g1392 134 PANTHER - 2 133 - -
Vra7g1392 134 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 55 133 IPR036312 -
Vra7g1392 134 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 2 133 - -
Vra7g1392 134 Pfam Hydrophobic seed protein 52 133 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1392 Vra-Chr7 31062258 31063049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1392 45 133 Acyl Lipid Metabolism Gene Families AT4G22490 32.584 3.95e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1392 - - gmx:100500229 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1392 7 31062258 31063049 Vra7g1392 7 31062258 31063049 ECH