Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1388 ATGGCGTCAAAGAGCTACTTCAAACAAGAGCACGATCTTGAGAAGAGGAGAGCTGAGGCTGCTAGAATCAGGGAGAAATACCCAGACCGTATCCCTGTGATTGTGGAGAAGGCAGAAAGAAGTGATATTCCAAGTATTGACAAGAAGAAGTACCTTGTCCCCGCTGATCTGACAGTTGGACAATTTGTCTATGTTATTCGAAAAAGGATTAAATTAAGTGCAGAAAAGGCAATATTTATCTTTGTGGACAACGTGCTTCCACCTACAGGAGCAATCATGTCTGCTATATATGAGGAGAAGAAGGAAGAGGATGGTTTTCTTTATGTTACTTACAGTGGGGAGAACACCTTCGGGGATCTGACTTCCCACTAG 372 0.4301 MASKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKEEDGFLYVTYSGENTFGDLTSH* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1388 123 CDD Ubl_ATG8 13 115 - -
Vra7g1388 123 Gene3D - 1 118 - -
Vra7g1388 123 SUPERFAMILY Ubiquitin-like 4 118 IPR029071 -
Vra7g1388 123 Pfam Autophagy protein Atg8 ubiquitin like 15 118 IPR004241 -
Vra7g1388 123 PANTHER AUTOPHAGY-RELATED PROTEIN 3 118 - -
Vra7g1388 123 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 3 118 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1388 Vra-Chr7 31002936 31006357 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1388 K08341 - gmx:100818620 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1388 7 31002936 31006357 Vra7g1388 7 31002936 31006357 ECH