Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1380 ATGGCTGACTCCTCTCAAGACCTCGACCAACTCCTCGACAGTGCTTTGGATGATTTTCAGTCCTTCAACCTTAATCCTTCTCTTCCAAGTGGGGGAGCAATTGCGAGCAAAAACGAGAGTCCTTCGTTGCCGTCGGGGGTTCAGGGATTGGGCATGGGTTTACCTGATTTGAGAACGAAGAAAAAGGGGAAGCAGAAGGCTTCGAAGGACAGCCACGTGGCGGAGGCGCTGAACAAGCTGAGGGAGCAGACCAGAGAGGCTGTGAAGGGCCTGGAGTCTATGACCCCTCCTGCTGCTGATGATTTGGGGAAGGATGCCTTGATGGAAGATTGGGTCAAACAGTTTGAGCAGCTTGCTGGCTCTCAGGATATGGAATCTATTGTGGAGACCATGATGCAGCAACTTCTGTCCAAAGAGATTCTTCACGAACCAATGAAAGAAATAGCAGAAAAATATCCTAAGTGGCTGGAAGACCACAAATCTAGCTTAAGCAAAGAAGAATATGACCGTTACGCACACCAATATGAATTGATACGAAACCTGAATGAAGTTTACGAAAATGATGCCGGAAACTTTAACAAGATTGTCGAGCTCATGCAGAAAATGCAAGAATGTGGACAACCACCAAATGAAATCGTCCAGGAGCTTGCTCCCGATTTCGATTTAGCGAGTCTTGGCCAGATATCTCCAGAGATGCTTGAAGGTCAGCAAAATTGTTGCATAATGTGA 729 0.4691 MADSSQDLDQLLDSALDDFQSFNLNPSLPSGGAIASKNESPSLPSGVQGLGMGLPDLRTKKKGKQKASKDSHVAEALNKLREQTREAVKGLESMTPPAADDLGKDALMEDWVKQFEQLAGSQDMESIVETMMQQLLSKEILHEPMKEIAEKYPKWLEDHKSSLSKEEYDRYAHQYELIRNLNEVYENDAGNFNKIVELMQKMQECGQPPNEIVQELAPDFDLASLGQISPEMLEGQQNCCIM* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1380 242 Gene3D Pex19, mPTS binding domain 112 225 IPR038322 -
Vra7g1380 242 Coils Coil 74 94 - -
Vra7g1380 242 PANTHER PEROXISOME BIOGENESIS PROTEIN 19-1 2 242 - -
Vra7g1380 242 MobiDBLite consensus disorder prediction 57 72 - -
Vra7g1380 242 Pfam Pex19 protein family 61 242 IPR006708 GO:0005777
Vra7g1380 242 MobiDBLite consensus disorder prediction 20 72 - -
Vra7g1380 242 PANTHER PEROXISOMAL BIOGENESIS FACTOR 19 2 242 IPR006708 GO:0005777
Vra7g1380 242 MobiDBLite consensus disorder prediction 20 45 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1380 K13337 - gmx:100527390 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1380 7 30899939 30904239 Vra7g1380 7 30899939 30904239 ECH