Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1332 ATGGAGGTTGCCTCAACTGCTTCTAGCTTCGCACTCAACAAGCAAATTATGGCATTGCCGTCTTCTTCTCGAACCGTAACCCCTATTCGAGCCATGAGTTCGTCGACCTCCTCCGTCAGGACATCTCTCTCCACCAATTTCATTGCTCCTCGTTCCTTAATCAGCAGCGCCTCTAGCCATTTCTCCGGCTACAAGCTCCGACCATCCTCCCTCAACCCGGCTTCATTTGGTGGCTCCAACGCCAAGCGAGGCGTCATTACTATGGTTATTCCATATTCAAGTGGGAGTGCCTATGAACAACCTCCACCGGACTTGGCTTCTTACTTGTACAAAAACCGAATTGTTTATTTGGGCATGTCTCTTGTTCCATCTGTCACTGAGTTGATTCTAGCAGAATTTCTTTACCTTCAATATGAAGATGATGATAAGCCTATCTACCTCTACATAAACTCCACTGGGACAACTAAGGGAGGTGAGAAGTTGGGTTATGAGACTGAGGCCTTTGCAATTTATGATGTGATGAGGTATGTCAAGCCTCCTATTTTCACTCTTTGTGTTGGTAATGCTTGGGGAGAAGCAGCATTGCTTTTGGCTTCAGGTGCAAAGGGAAACCGCTCTGCTTTGCCATCATCAACAATAATGATAAGACAGCCAATTGCAAGGTTTCAAGGTCAAGCAACAGATGTTAACCTTGCAAGAAGAGAAGTCAATAATGTGAAGGCAGAATTAGTTAAATTGTATGCAAAGCATATGGAAAAAACACCCGAGCAGATTGAAAATGATATTCAGCGTCCAAAGTATTTTAGCCCCAGTGAAGCTGTTGAGTATGGTATCATAGACAAGGTTATATACAATGATAGGGGGTCTGAGGATCGTGGAGTTGTTTCTGATCTTAAAAAGGCACGGCTTATTTGA 915 0.4404 MEVASTASSFALNKQIMALPSSSRTVTPIRAMSSSTSSVRTSLSTNFIAPRSLISSASSHFSGYKLRPSSLNPASFGGSNAKRGVITMVIPYSSGSAYEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARREVNNVKAELVKLYAKHMEKTPEQIENDIQRPKYFSPSEAVEYGIIDKVIYNDRGSEDRGVVSDLKKARLI* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1332 304 CDD S14_ClpP_2 104 282 IPR001907 GO:0004176|GO:0004252|GO:0006508
Vra7g1332 304 Pfam Clp protease 104 284 IPR023562 -
Vra7g1332 304 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 13 302 IPR023562 -
Vra7g1332 304 SUPERFAMILY ClpP/crotonase 99 285 IPR029045 -
Vra7g1332 304 PRINTS Clp protease catalytic subunit P signature 104 119 IPR001907 GO:0004176|GO:0004252|GO:0006508
Vra7g1332 304 PRINTS Clp protease catalytic subunit P signature 144 164 IPR001907 GO:0004176|GO:0004252|GO:0006508
Vra7g1332 304 PRINTS Clp protease catalytic subunit P signature 183 200 IPR001907 GO:0004176|GO:0004252|GO:0006508
Vra7g1332 304 PRINTS Clp protease catalytic subunit P signature 204 223 IPR001907 GO:0004176|GO:0004252|GO:0006508
Vra7g1332 304 PRINTS Clp protease catalytic subunit P signature 261 280 IPR001907 GO:0004176|GO:0004252|GO:0006508
Vra7g1332 304 Coils Coil 229 249 - -
Vra7g1332 304 Gene3D - 78 289 - -
Vra7g1332 304 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 13 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1332 Vra-Chr7 30275219 30283911 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1332 K01358 - gmx:100780029 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1332 7 30275219 30283911 Vra7g1332 7 30275219 30283911 ECH