Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1321 ATGCATCACCACCACCACAAGCCCGACCTTCACATCGGAGAAGAGAACTCACACCTCTCTTCTGAGGATGCTACTTTAATTCCTCTTCCCCAAAACCAAAAGCAATTGCAAACCCATTTCTCGATTCAGGTTTCACCCTCCTCTCCCCATCCACCGCCACCAAACTCACCAAACACTCCCTGTCACCATGACCGCTTCTCCAATAACCCATCTGAAATTTCGCCCCGCAAGAGAATACCCGTCATGGCCCTCCCTTGCTGTCTCTTTCCAACACCCTTTGGCGCAAAGTTTCCAACTTCCAAGCTTCTCCCTCGCTTCCGTTTCCTCATGTTCCTCCCCCTTCCTTCCCTCTACTTTTTCTTTTCAAACCCTAGCCCTTTGGATTTCTTCTCCGTCATCGCTTGCTCAGCAGCACTGTTGATTTCCCTCAATCTGGCACTGTTGCTCTTCACTCGATTGTTCCCCGCCAAATTTTCATCATCGTCTTCTTCTTCCTCCTCCTCTTCTACTCACCCTGTGGTGTGGTCCATTGGGTCGAACCCTAAGCAAGTGAAGAGCACAAGTTGGGGATGTTGGGTGCAAGTTTACAGCAATGGGGATGTGTACGAGGGAGAATTCCAGAAGGGAAAGTGTTGGGGAAGTGGGGTTTATCACTATCACATGAGTGGGAGGTATGAGGGGGATTGGGTTGATGGGAAGTATGATGGGTATGGTGTGGAGACCTGGGCAAGGGGGAGCAGGTATAGAGGGCAGTATAGGGAAGGTTTGAGGCATGGAATGGGGATCTATAGGTTCTATAGTGGTGATGTGTACGGTGGTGAGTGGTCTAAAGGGCAGTGTCATGGGTTTGGAGTCCACACTTGCTATGATGGGAGCCGCTATGTTGGGGGGTTCAAATGGGGTGTCAAACATGGACACGGACAATACCATTTCAGAAATGGAGACAAATACGCTGGCGAATATTTTGCCGACAAGATGCATGGTTTTGGAGTGTATCAATTTCAGAATGGTCATCGGTATGAGGGGGCATGGCATGAAGGAAGAAGACAAGGACTGGGAATGTACACTTTCCGAAATGGGGAAACACAGTGTGGCCACTGGCAGAATGGGATTCTTGATGATCCTAAAAGACAGAATAGTCCTACTGGGTCTCCATGTGATGTGGACCATGCCAAGGTTTCCAGTGCAGTACAGGATGCACATTCTGCTGCTGAGAAAGCTTACAGCATGGTAAAGGTAGATGACGGGATGAATAAAGTAGTGGCAGCAGCTAATAAAGCAGCCAACGCAGCCAGAGTTGCAGCTGTAAAAGCAGTGCAAAATAGGATGCACCACAACAACAGTAATGATGATAAATGA 1359 0.4871 MHHHHHKPDLHIGEENSHLSSEDATLIPLPQNQKQLQTHFSIQVSPSSPHPPPPNSPNTPCHHDRFSNNPSEISPRKRIPVMALPCCLFPTPFGAKFPTSKLLPRFRFLMFLPLPSLYFFFSNPSPLDFFSVIACSAALLISLNLALLLFTRLFPAKFSSSSSSSSSSSTHPVVWSIGSNPKQVKSTSWGCWVQVYSNGDVYEGEFQKGKCWGSGVYHYHMSGRYEGDWVDGKYDGYGVETWARGSRYRGQYREGLRHGMGIYRFYSGDVYGGEWSKGQCHGFGVHTCYDGSRYVGGFKWGVKHGHGQYHFRNGDKYAGEYFADKMHGFGVYQFQNGHRYEGAWHEGRRQGLGMYTFRNGETQCGHWQNGILDDPKRQNSPTGSPCDVDHAKVSSAVQDAHSAAEKAYSMVKVDDGMNKVVAAANKAANAARVAAVKAVQNRMHHNNSNDDK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1321 452 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 267 375 - -
Vra7g1321 452 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 29 445 - -
Vra7g1321 452 MobiDBLite consensus disorder prediction 1 21 - -
Vra7g1321 452 Pfam MORN repeat 248 270 IPR003409 -
Vra7g1321 452 Pfam MORN repeat 340 361 IPR003409 -
Vra7g1321 452 Pfam MORN repeat 202 220 IPR003409 -
Vra7g1321 452 Pfam MORN repeat 273 293 IPR003409 -
Vra7g1321 452 Pfam MORN repeat 294 315 IPR003409 -
Vra7g1321 452 Pfam MORN repeat 317 339 IPR003409 -
Vra7g1321 452 Pfam MORN repeat 225 247 IPR003409 -
Vra7g1321 452 MobiDBLite consensus disorder prediction 37 69 - -
Vra7g1321 452 PANTHER MORN REPEAT PROTEIN 29 445 - -
Vra7g1321 452 SMART morn 292 313 IPR003409 -
Vra7g1321 452 SMART morn 338 359 IPR003409 -
Vra7g1321 452 SMART morn 269 290 IPR003409 -
Vra7g1321 452 SMART morn 200 221 IPR003409 -
Vra7g1321 452 SMART morn 246 267 IPR003409 -
Vra7g1321 452 SMART morn 315 336 IPR003409 -
Vra7g1321 452 SMART morn 223 244 IPR003409 -
Vra7g1321 452 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 196 301 - -
Vra7g1321 452 Gene3D - 323 386 - -
Vra7g1321 452 Gene3D - 277 322 - -
Vra7g1321 452 Gene3D - 184 231 - -
Vra7g1321 452 Gene3D - 232 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1321 Vra-Chr7 30098505 30102947 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1321 194 373 Acyl Lipid Metabolism Gene Families AT1G60890 35.556 1.88e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1321 - - pvu:PHAVU_003G226200g 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1321 7 30098505 30102947 Vra7g1321 7 30098505 30102947 ECH