Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1315 ATGGACGGTCTGATGAAGGACTTGGTCGATCTTGCTATCGGTGGTGCCGATCACAACGATCGCCAAGAAGAACACGGTGAACGCTCCTGGGCCGACCTTGTCTCCGGCGATCAGGATCAGGATCACCCTCGTCCTCATCAGCAGCAGCAGCAGCAACAGACACAGTGGTCCAACTCACCCCAAAAGGAAGAACGGTGGGAAGAAGATAGTCACAGTTATACCAACAGGCCCCATCAGGCAGTATATCGTCCTCAGCATGAGGAGAGCCAATCTCAAAATTTGAACACTGGCCACAAGGTGAATGAAGATCAAGATGGATGGCAGACTGTTGGCAAACCTTCAAGGCGGCCACAAAAGGTTATTGAAGATCAAGATGGATGGCAGACTGTTGGCAAACCTCCAAGGCGGACACAAAAGGTTCCGAAGGAAACTTGGCAGAACTACAAACGGCCTTCTCATGAGCAAGAATACTCTGATGAGGTTGAAGTCGGTGTTAGTTTGGAGCCCTCAGAAGATGAACTTGCTGATCTATCAAAAGCTTGTGACAAACTCTGGGATCTTGATTTAAATCGGTTGGTACCTGGCAAAGACTATGAAATTGACTGTGGTGAAGGGAAAAAGGTTTTCCAAAAGCAAGATATGGCAGAGGGGACCTTGTTTACTTGGGTTAGTGATGATGTATTCAGAAAGCCTACATTTGCTCGTTTTCTCTCACTTCTAGATAATTACAATCCACATGAAGGATGTAAGGAAGTAGTCACATCCGAAGAGAGACAAGAGCAAGCTTCTTTCATAGAAGAAATCAGTAGAACAGCACCAATTAAATATCTTCACAAGTATCTTGCATCTAAGGGAATTGCATCAGGGAGCTACCAAGATTTCAAACGAATGATGACCAATCTATGGTTTGACCTTTATGGCCGTGGTGGCACTTCTGGCTCCTCTTCTTCTTTTGAACATGTTTTTGTTGGAGAAATCAAACAAAGTGGCGAAGTTTCTGGCTTCCATAACTGGCTGCAGTTTTACCTTGAAGAAGAAAAGGGGAGAGTTGATTATCAGGGCTATATTTTCCCCCGTCGACGGGGAGAAACTCCTGATTCGGAAACGCAGCTTCTAACCGTTCAGTTTGAATGGAATGGTGTGCTGAAATCTTTATCAAGCACTTTGGTTGGAGTGAGCCCTGAGTTTGAAATTGCTTTATATACCCTGTGTTTCTATGTTGGTAGGGAGGATAACCACATTCAACTCGGTCCATATGCAGTTAATATCAAGTGCTATCGTTTTGGCAATAAGATTGGATCTGTTTTCCCCATTGCAGAGTCTTGA 1326 0.448 MDGLMKDLVDLAIGGADHNDRQEEHGERSWADLVSGDQDQDHPRPHQQQQQQQTQWSNSPQKEERWEEDSHSYTNRPHQAVYRPQHEESQSQNLNTGHKVNEDQDGWQTVGKPSRRPQKVIEDQDGWQTVGKPPRRTQKVPKETWQNYKRPSHEQEYSDEVEVGVSLEPSEDELADLSKACDKLWDLDLNRLVPGKDYEIDCGEGKKVFQKQDMAEGTLFTWVSDDVFRKPTFARFLSLLDNYNPHEGCKEVVTSEERQEQASFIEEISRTAPIKYLHKYLASKGIASGSYQDFKRMMTNLWFDLYGRGGTSGSSSSFEHVFVGEIKQSGEVSGFHNWLQFYLEEEKGRVDYQGYIFPRRRGETPDSETQLLTVQFEWNGVLKSLSSTLVGVSPEFEIALYTLCFYVGREDNHIQLGPYAVNIKCYRFGNKIGSVFPIAES* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1315 441 MobiDBLite consensus disorder prediction 1 159 - -
Vra7g1315 441 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 173 441 IPR018998 GO:0004521
Vra7g1315 441 MobiDBLite consensus disorder prediction 13 44 - -
Vra7g1315 441 Pfam Endoribonuclease XendoU 176 437 IPR018998 GO:0004521
Vra7g1315 441 MobiDBLite consensus disorder prediction 45 60 - -
Vra7g1315 441 PANTHER - 135 440 - -
Vra7g1315 441 CDD XendoU 173 437 IPR018998 GO:0004521
Vra7g1315 441 MobiDBLite consensus disorder prediction 75 103 - -
Vra7g1315 441 MobiDBLite consensus disorder prediction 136 159 - -
Vra7g1315 441 PANTHER PLACENTAL PROTEIN 11-RELATED 135 440 IPR039787 GO:0004521
Vra7g1315 441 SUPERFAMILY EndoU-like 175 439 IPR037227 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1315 K14648 - gmx:100813919 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1315 7 30047750 30051397 Vra7g1315 7 30047750 30051397 ECH