Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1308 ATGGAGGCGTCGAAATTTGACCAAGGTTTGAGCTATGATTTCTGTGTTGCATACCTTTCCAATTGGCAGGCACCAAGCAGAAACGTGGAAGATTACTGGGTGAAGTCAATTGAGTTACTGAAATCCAACGGAACCAACATGCTTTCCTTCATTTCGAAGCTCTTGAACGACAAGAGATTTAATGAACGCACGAAGGATAGCCTAAAAGGTTGCTTTGATTCTTACAAGGATACGATGTCGGAATTAGATGCTGCTGTGGTTGCTTTCAAGGCCAAGGATTTGGACACTGCTGGCATCAAAGTGAGTGAATCCTTAGATACCCCACTTATCTGTCAACGCTCATTCAACGATCCCAAAGGTAGAAACCTGTCTCCTTTAACAAACCTGAATAACGCCTACTTCAAACTCAACGTAATACCTCTCGTGCTCCTCCAAATCTTCACCAAACAATCCTAG 456 0.432 MEASKFDQGLSYDFCVAYLSNWQAPSRNVEDYWVKSIELLKSNGTNMLSFISKLLNDKRFNERTKDSLKGCFDSYKDTMSELDAAVVAFKAKDLDTAGIKVSESLDTPLICQRSFNDPKGRNLSPLTNLNNAYFKLNVIPLVLLQIFTKQS* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1308 151 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 10 146 IPR035513 -
Vra7g1308 151 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 7 144 - -
Vra7g1308 151 CDD PMEI-Pla_a_1_like 7 146 IPR034088 -
Vra7g1308 151 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 144 - -
Vra7g1308 151 SMART PMEI_2 2 143 IPR006501 GO:0004857
Vra7g1308 151 Pfam Plant invertase/pectin methylesterase inhibitor 11 139 IPR006501 GO:0004857
Vra7g1308 151 Gene3D Invertase/pectin methylesterase inhibitor family protein 6 147 IPR035513 -
Vra7g1308 151 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 144 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1308 Vra-Chr7 29906450 29907049 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1308 - - pvu:PHAVU_003G115000g 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1308 7 29906450 29907049 Vra7g1308 7 29906450 29907049 ECH