Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1080 ATGCCCAAGGCGCCACCGCCCCTAATCTACTATCTCTCGGAGCACCCCTCCATCGTGGGGTTCCGGTGGAGCCATGCCCAATCATGGGGCGCCACGTGGTCCTTCCTCTTCTACTCCATCGCCTCCTACCTCCTCCTCTCTCTCTTCCTCCACCTCTCGCTTGTTCTTTTCCGTCGCCACCGTCCCATCCCCATCGGTCCCCTCGCGGCAATTCACAGCCTTTCCATGTCACTCACCTCCGTCACCATCTTTGCCGGAATCCTAATATCTACCGCCGCCGAGATCCGCGACACCCGGTGGTTCTGGCAGCGGTCCAAAACCCCACTGGAGTGGCTCCTCTGCTTTCCTCTGGGAACCCGCCCCTCCGGCCGCGTCTTCTTCTGGTCCTACGTCTATTACCTCTCCCGCTTCCTCCACATGTTCCGAACCCCTCTAACCATCCTACGACGCCGCAGGTTGTCGTTTTTCCACCTCCTGAACCACTCCATCTCCGCTTTCGCTTCCTTCCTCTGGCTGGAATTCTCGCAGTCCTTTCAAGTCCTGGCCATCCTCTTCGCCACCCTCGTCTACGCCCTCGTTTACGCCTACCGCTTCTGGACCGCCATAGGCCTGCGCGGCGCGTGCTTCCCCTTCGTTCTCAACTGCCAGATCGCGCTCCTCGCTTGCAATGTGGCGTGTCATGTCGGCGTCTTCTTCCTCCACTTCTTCTTAAAAGGCGGCTGCAACGGGATTGGCGCGTGGCTCTTCAACTGCGTCCTGAACCTCGCTCTTCTCACGCTCTCTCTCAACTTCTACGTGAGGATGTACGTCGGGAAAAGAAGAATGCCGAGGAGCGTTGCTCCTTCGCTTTCTGAAGCGCGTGACTGCAAATAA 873 0.5865 MPKAPPPLIYYLSEHPSIVGFRWSHAQSWGATWSFLFYSIASYLLLSLFLHLSLVLFRRHRPIPIGPLAAIHSLSMSLTSVTIFAGILISTAAEIRDTRWFWQRSKTPLEWLLCFPLGTRPSGRVFFWSYVYYLSRFLHMFRTPLTILRRRRLSFFHLLNHSISAFASFLWLEFSQSFQVLAILFATLVYALVYAYRFWTAIGLRGACFPFVLNCQIALLACNVACHVGVFFLHFFLKGGCNGIGAWLFNCVLNLALLTLSLNFYVRMYVGKRRMPRSVAPSLSEARDCK* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1080 290 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 8 276 IPR002076 GO:0009922|GO:0016021
Vra7g1080 290 PANTHER ELONGATION OF FATTY ACIDS PROTEIN 3-LIKE 8 276 - -
Vra7g1080 290 Pfam GNS1/SUR4 family 32 274 IPR002076 GO:0009922|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1080 Vra-Chr7 26406082 26407362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1080 8 254 Acyl Lipid Metabolism Gene Families AT4G36830 65.339 4.46e-113 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1080 - - pvu:PHAVU_003G251300g 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0649 11 5199525 5201231 Vra7g1080 7 26406082 26407362 PCT