Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0913 ATGACGACCGATACTACTGCCGATAACAATGCCATCAATGCTTGGCTTCCGGTCACTGCTTCACGAAATGCCAAATGGTGGTACTCTGCCTTCCACAACCTCACCGCCATGGTGGGTGCCGGTGTCCTTACTCTCCCTTATGCCATGTCTATGATGGGCTGGGGTCCAGGGAGTGTTATTCTCATCCTATCATGGATCATTACCTTGTTCACCCTATGGCAAATGGTTGAGATGCACGAAATGGTGCCTGGTGAGAGACACGACAGGTATCACGAACTAGGGCAGAAAGCGTTTGGAGAGAAACTGGGTCTCTACATCGTGGTTCCTCTGCAGCTCCTTGTTGAGGTTGGCACGTGCATTGTGTACATGGTCACGGGAGGGAACTCACTGAAGAAGTTTCAAGAAACTGTTTGCCCCTCATGCCAAGAAATCAGGGGCTCCTATTGGATCATGGTCTTTGCTTCTGTGAACTTCGTTCTCTCTCTCTGTCCAAACTTCAACTCTATTTCTGCAGTATCTTTGGCCGCAGCAGTCATGTCTCTCGCTTACTCAACCATTGCTTGGGTGGCTTCCCTTAAGAAGGGCACTGTGGCGAATGTGGACTATGGGTACAAAGCACACAGCACTGCGGATGGCGTGTTCAACTTCATGACTGCTATGGGAGACGTAGCATTCGCTTATGCAGGTCATAATGTGGTTTTGGAAATCCAAGCAACAATACCTTCTACACCTGAGAAACCTTCCAAGATAGCAATGTGGAAAGGAGTCGTAGTTGCATACTTGGGAGTTGGCTTCTGCTACTTTCCTGTGGCCTTCATTGGATACTATATCTTTGGAAACTCTGTCGATGATAATATCCTCATCACACTAGAGAAACCTTCTTGGCTTATTGCAGCAGCTAACATGTTTGTTATTATCCATGTTATTGGAGGCTACCAGGTATTCTCAATGCCCGTCTTTGATATGATGGAAACCTTTTTGGTGAAGCGAATGAAATTCCGTCCTTGTTTTACACTCCGCTTTGTTGCGCGCACTGTCTTTGTGTTATTGACAATGTTAGTTGGCATATGCGTCCCCTTCTTTGGTTCTCTTCTTGGATTTTTAGGAGGGTTTGCCTTTGCCCCAACAACTTACTTTCTACCGTGTATCATATGGCTTAAACTCTACAAACCAAGGAGATTTTCCTTATCCTGGATAGTGAATTGGACATGCATCGTGCTTGGGATTCTGTTGGTGATACTAGCTCCAATTGGTTCATTAAGAAAAATCATTATTTCAGCTAAGCACTACAAGTTCTTTTCATGA 1305 0.4552 MTTDTTADNNAINAWLPVTASRNAKWWYSAFHNLTAMVGAGVLTLPYAMSMMGWGPGSVILILSWIITLFTLWQMVEMHEMVPGERHDRYHELGQKAFGEKLGLYIVVPLQLLVEVGTCIVYMVTGGNSLKKFQETVCPSCQEIRGSYWIMVFASVNFVLSLCPNFNSISAVSLAAAVMSLAYSTIAWVASLKKGTVANVDYGYKAHSTADGVFNFMTAMGDVAFAYAGHNVVLEIQATIPSTPEKPSKIAMWKGVVVAYLGVGFCYFPVAFIGYYIFGNSVDDNILITLEKPSWLIAAANMFVIIHVIGGYQVFSMPVFDMMETFLVKRMKFRPCFTLRFVARTVFVLLTMLVGICVPFFGSLLGFLGGFAFAPTTYFLPCIIWLKLYKPRRFSLSWIVNWTCIVLGILLVILAPIGSLRKIIISAKHYKFFS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0913 434 Pfam Transmembrane amino acid transporter protein 23 418 IPR013057 -
Vra7g0913 434 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 5 429 - -
Vra7g0913 434 Gene3D Amino acid/polyamine transporter I 19 429 - -
Vra7g0913 434 PANTHER OS05G0424000 PROTEIN-RELATED 5 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0913 Vra-Chr7 20251969 20253841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0913 7 434 Organic Solute Cotransporters AT1G24400 72.897 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0913 - - gmx:100809608 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1419 2 22340946 22343413 Vra7g0913 7 20251969 20253841 PCT