Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0303 ATGACAGAAAACTGCATAGCACTCAAACCAGACCACAGCAACAGTCACCCTCAGGAAGGACCCCCCAAGATCACGACTGAGACTGTCCTTCCCATACAAACAAACGACCAATCTTTTCTTAAACTGGCTATGTACCCCATAACTTTGAAGTTTGAGGAGTTGATCTACAAAGTTAAAGTAGAGCAGAAGGGTCTGTGTTGGGGGAGCACAAGGAGTTCCAGAGAGAAGACCATACTGAAAGGAGTCACTGGTATGGTTTGTCCCGGAGAAATGATGGCTATGTTGGGGCCTTCTGGGAGTGGCAAAACCACACTTCTCACAGCCCTTGGGGGAAGGCTGAGTGGCAAACTATCTGGAAAGGTCACGTACAACAACCAGCCTTTTTCAGGAGCCATGAAAAGAAGAACAGGTTTTGTGGCTCAGGATGATGTGTTATACCCCCATCTCACTGTGACTGAAACACTACTCTTCACTGCACTTCTCAGGCTTCCCAACATCTTGACCAAGGAAGAAAAAGCTCAGCATGTAGAGCATGTAATCAGTGAGCTAGGACTGAGCAGGTGCAGGGGTAGCATGATTGGAGGCCCTCTATTCAGAGGGATATCAGGAGGGGAGAGAAAAAGGGTGAGCATAGGCCAGGAAATGTTAATCAATCCAAGCCTGTTGTTGCTGGATGAACCCACTTCTGGCTTGGACTCTACAACAGCACAAAGGATCATAACCACAATCAAACGCTTGGCTAGTGGAGGGAGAACTGTTGTCACCACCATTCATCAACCCTCTAGTCGCCTCTATCACATGTTTGATAAACTGGTATTGCTCTCTGAAGGATGTCCCATCTATTATGGCCCCGCTTCAACTGCAATGGCCTACTTTTCTTCTGTTGGTTTTTCCACATCCATGATTGTCAATCCAGCTGACTTGTTGCTTGATCTTGCCAACGGAATTGCTCCGGACTCCTCCAAGCATGCAACTGAACAAAGTGAAAGCCAGGAGGCAGAAAATAAGTTGGTTAGAGAAGCCTTAATCTCTGCTTATGACAAAAATATAGCTACTAAGCTGAAAGAAGAATTATGCAGCTTGGAATGCGAAGTCATTAGGAATGCTTCCACTAGAAATCACATAAAACCGGAGCGATGGTGTACAAGTTGGTGGCATCAGTTCAAAGTGCTGTTGCAAAGGGGGCTGAAGGAGAGAAGGTTTGAAGCCTTCAACAAGCTGAGAATTTTCCAAGTCATAAGTGTCGCTTTCCTTGGAGGACTTCTGTGGTGGCACACCCCAGAATCCCACATTGGAGACCGGATAGCCCTGCTGTTTTTCTTCTCTGTCTTCTGGGGATTCTACCCTCTCTACAATGCTGTTTTCACATTCCCACAAGAGAGAAGGATGCTGATAAAGGAACGTTCATCTGGGATGTACCGTCTCTCTTCCTACTTTGTAGCAAGAACAGTAGGAGACTTGCCAATAGAGCTTGCACTTCCAACTGCATTTGTCTTGATAATCTATTGGATGGGAGGGCTTAATCCTCATCCACTGACCTTTCTCCTTTCCCTCCTGGTGGTCCTTTACAGTGTACTTGTTTCTCAAAGCCTTGGCTTAGCACTTGGTGCCATTTTGATGGAGGTGAAACAGGCCACTACTTTAGCTTCTGTGACAACCCTTGTGTTCCTCATTGCCGGAGGGTACTATATACAACAGATTCCTCCCTTCATAGAGTGGCTCAAGTACATAAGCTATAGCTACTACTGTTACAAGCTTCTTGTTGGTGTGCAGTACATGGATGATGATTATTATGAGTGCTCAAAAGGGGTATTGTGCAAGGTTGGAGAATTTCCTCCAATAAAATCAGTGGGTTTGAACCACTTGTGGGTGGATGTGTCTATAATGGCCATGATGTTGGTAGGTTACAGACTAGTTGCTTATTTAGCACTGCAGAGAGTGAGGTAG 1947 0.4576 MTENCIALKPDHSNSHPQEGPPKITTETVLPIQTNDQSFLKLAMYPITLKFEELIYKVKVEQKGLCWGSTRSSREKTILKGVTGMVCPGEMMAMLGPSGSGKTTLLTALGGRLSGKLSGKVTYNNQPFSGAMKRRTGFVAQDDVLYPHLTVTETLLFTALLRLPNILTKEEKAQHVEHVISELGLSRCRGSMIGGPLFRGISGGERKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRIITTIKRLASGGRTVVTTIHQPSSRLYHMFDKLVLLSEGCPIYYGPASTAMAYFSSVGFSTSMIVNPADLLLDLANGIAPDSSKHATEQSESQEAENKLVREALISAYDKNIATKLKEELCSLECEVIRNASTRNHIKPERWCTSWWHQFKVLLQRGLKERRFEAFNKLRIFQVISVAFLGGLLWWHTPESHIGDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFVARTVGDLPIELALPTAFVLIIYWMGGLNPHPLTFLLSLLVVLYSVLVSQSLGLALGAILMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIEWLKYISYSYYCYKLLVGVQYMDDDYYECSKGVLCKVGEFPPIKSVGLNHLWVDVSIMAMMLVGYRLVAYLALQRVR* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0303 648 Pfam ABC-2 type transporter 387 592 IPR013525 GO:0016020|GO:0140359
Vra7g0303 648 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 32 646 - -
Vra7g0303 648 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524
Vra7g0303 648 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 301 IPR003439 GO:0005524
Vra7g0303 648 MobiDBLite consensus disorder prediction 1 25 - -
Vra7g0303 648 CDD ABCG_EPDR 46 283 - -
Vra7g0303 648 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 32 646 - -
Vra7g0303 648 Gene3D - 68 295 IPR027417 -
Vra7g0303 648 Pfam ABC transporter 79 229 IPR003439 GO:0005524
Vra7g0303 648 SMART AAA_5 88 278 IPR003593 -
Vra7g0303 648 Pfam ABC-2 type transporter 258 325 IPR043926 GO:0140359
Vra7g0303 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 294 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0303 Vra-Chr7 4704407 4707696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0303 78 262 Calmodulin-binding Proteins AT2G36910 31.088 2.04e-11 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0908 11 7796681 7799786 Vra7g0303 7 4704407 4707696 PCT