Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0057 ATGGTGAACCTGGTTGCAGCGCAGAGGCCATTGCTTCATGGCCTAATGAAGATGGCGGGGATCAGGCCGTACACGGTGGAGATTGAGCCCGGGACCGTGATGAGTTTCTGGGTCCCTTCAGAGACCATAACGAAGCCGAAGAAAAAAGATGAAAAGCCGAGAATCATAGGGAAACCCAGCAAGCCCACGGTGGTTCTGGTGCATGGTTTCGCGGGCGAAGGAATCGTGACGTGGCAGTTCCAAGTGGGGGCGTTGACGAAGAAGTACGCTGTTTATGTTCCGGATCTTCTGTTCTTCGGAGGGTCCTCGACCGATAAAGCGGACAGGTCGCCAAGGTTTCAAGCAGAGTGTCTGGTGAGGGCCTTAAGGAAACTTGGGGTGGAGAAATGCATAGTGGTTGGGTTCAGTTACGGGGGAATGGTGGCGTTTAAGATGGCTGAGATGTACCCTGAAATGGTTGAAGGAATGGTTATTTCTGGGTCCATTGTCGCCATGTCGAACTCCCTGAGAGCCGCCTCTCTGCAACAGCTTGGGTTCTCTTCTTCTTCGGATCTCTTGATGCCTACCACTGTTAAGGGTCTTAAGGACCTCTTGTCCGTCGCTGCTCACAAAAAACTCTGGTTTCCTGATCGTTTGCACAAAGATTTTCTTGAGGTGATGTTTACGAATAGAAAGGAACGGGGTGAACTATTGGAGGGCTTAGTAATTAGCAACACAGATATGGTGGCCACCCCCAAATTTCCACAGAGAATACATCTTTTATGGGGCCAGAACGATCAAATTTTCAAAGTGGAGCTTGCACAAAATATGAAAGAAGAACTAGGGGATGGCACAACGTTTGAAAGCATAGAGAAAGCTGGTCACCTTGTTCAGCTGGAGCGACCCTGTGTCTACAATAGATGCCTCAAGAACTTTCTTTCTTCCTTCTTCGTCAAAAATCATTAA 945 0.4878 MVNLVAAQRPLLHGLMKMAGIRPYTVEIEPGTVMSFWVPSETITKPKKKDEKPRIIGKPSKPTVVLVHGFAGEGIVTWQFQVGALTKKYAVYVPDLLFFGGSSTDKADRSPRFQAECLVRALRKLGVEKCIVVGFSYGGMVAFKMAEMYPEMVEGMVISGSIVAMSNSLRAASLQQLGFSSSSDLLMPTTVKGLKDLLSVAAHKKLWFPDRLHKDFLEVMFTNRKERGELLEGLVISNTDMVATPKFPQRIHLLWGQNDQIFKVELAQNMKEELGDGTTFESIEKAGHLVQLERPCVYNRCLKNFLSSFFVKNH* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0057 314 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Vra7g0057 314 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Vra7g0057 314 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Vra7g0057 314 PRINTS Alpha/beta hydrolase fold signature 251 265 IPR000073 -
Vra7g0057 314 SUPERFAMILY alpha/beta-Hydrolases 56 306 IPR029058 -
Vra7g0057 314 Pfam alpha/beta hydrolase fold 62 177 IPR000073 -
Vra7g0057 314 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 309 - -
Vra7g0057 314 Gene3D alpha/beta hydrolase 16 309 IPR029058 -
Vra7g0057 314 PANTHER SI:DKEY-122A22.2 2 309 - -
Vra7g0057 314 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Vra7g0057 314 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Vra7g0057 314 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Vra7g0057 314 PRINTS Epoxide hydrolase signature 283 305 IPR000639 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0057 Vra-Chr7 1266201 1268933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0057 57 170 Acyl Lipid Metabolism Gene Families AT4G15960 28.571 4.52e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0057 - - gmx:100816070 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0692 11 5594646 5599446 Vra7g0057 7 1266201 1268933 PCT