Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2004 ATGGTAGGAAAGGTGCAAGAATGGCGATGCGTTTGGAATTGGATTCATCGCCGGAATTTGAGATGCAGTCAGCAGCGTTTCTTGCACGACGGCCCAGACACCGTAGAGGAGCTTCTCGACAGGCACCTTGTCAAAAACAAAAACAAAAACGATAACGACGAGTTCGAGAATCGGAGGCAACTCACCAGCACTCGCCGCGAAGCGCTGAGTCTGTACCGTGACATTCTTCGGGCCACCCGATTCTTCATGTGGCCCGATTCCAGAGGCGTCATCTGGCGCGACGTACTCAGACAAAATGCCCGAACAGAATTCGAACAGGCCCGCTTCGAAACCGACCCGGAAATCGTAACCCGACTGCTTATCGGGGGACGCGAAGCCCTACACTCCGCTATCGACAAGCTCGCCGAGAAGCATAGACATAACATTCAGAAAGATAATCCCTCTGATTCCCATCCACGCTGA 462 0.5303 MVGKVQEWRCVWNWIHRRNLRCSQQRFLHDGPDTVEELLDRHLVKNKNKNDNDEFENRRQLTSTRREALSLYRDILRATRFFMWPDSRGVIWRDVLRQNARTEFEQARFETDPEIVTRLLIGGREALHSAIDKLAEKHRHNIQKDNPSDSHPR* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2004 153 Pfam Complex 1 protein (LYR family) 66 127 IPR008011 -
Vra6g2004 153 PANTHER COMPLEX 1 PROTEIN CONTAINING PROTEIN, EXPRESSED 1 149 - -
Vra6g2004 153 CDD Complex1_LYR_LYRM7 68 143 IPR045298 GO:0034551
Vra6g2004 153 PANTHER COMPLEX 1 PROTEIN CONTAINING PROTEIN, EXPRESSED 1 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2004 Vra-Chr6 36698175 36699859 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g2004 - - gmx:100781648 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2004 6 36698175 36699859 Vra6g2004 6 36698175 36699859 ECH