Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1972 ATGGCACTGACTTTGAAAGAGGAGGATGCAGCTGATTGGGTTTACAGAGGAGAAGGAGCTGTTAATCTTGTGCTCGCTTACGCTGGATCCTCTCCTTCTTTTATTGGGAAAGTGATCCGCTTACGTAAGGCTCCGAATAATGGATTGGAGTCAAATGGTGTGAGTGTGAGGAATAGCATAGCTTTGACTCCTCAAGAACGTATCCTCTGGAAAAATGTGGATCAACTTATTTCCTCTTCTGACAAGGAAATCGTTGGTCAACTATATGTGGAGCATGTCATGAAGCCCTTACTTGGTTCCAACTATGTTGATGCTGGGATGCACATCCTGGTGACCAGGGAATTCCTTGAGTTGGTTGAGAAGAATGTTACTGGTCAACGTCCTGTGTGGCGAGTTGATGCTGCGCGGGTTGATACAGAGTGTGATTTTGGCCTTCTCATGTCCGATCATTCACTTTTTGCTTATGGAAGTCCAAGACCTAGCCCCTGCATATCTGTTGAGATAAAGCCCAAATGTGGATTCCTTCCATTTTCAAGATTCATATCTGAAGGAAATGCTATCAAAAGGAGAACAACTCGATTTGAAATGCACCAAATACTGAAATTGCATCATGGAGAGATATCACGGCTAAGTGAGTACAATCCACTTGATCTATTCTCTGGATCCAAGGAAAGAATTCAGAAAGCTATTAAAGGTCTTCTTATAACTCCTCAAAACAATTTCCGGGTATTTTTAAATGGCTCTCTCATACTTGGAGGTCTAGGGGGTGTTGCAAAAAATACAGATGTGTGTATTGCAAAAAAATTTGAAGATGAGCTTAAGTCAGTCATTGAAGTTGATGATGGTCTATGCACAGAGAACTTACTTACTCTTGTTACTGAGGCTTTGCAAAAGTCAGGAGTTCTTGATAAGCTCCTGGATGTTCAGAAGCTTGATAGTATTGACATAGAAGGAGTCATTCATGCATATTATAACATTACTTCTGAACAGTGCATGGTGTGTAAGGAATTGAGTGAAGAACAGGCAAAAATATATGCTTCTTTGCATTCAGCTTCATTTGATGAAAGCTTGAGAATAGTAAAGGACTACCTGATAGCAGCAACTGCAAAAGACTGCAGTTTGATGTTGTGTTTTAGACCAAGGAATGAGGAGGATTCTGGAATGGTGTACAATAATGTATACCTTGAGTCAACTAAGCAGGCCTTTGATTTTAAGGTATATTTTATCGACCTTGATTTAAAGCGCTTGAGTAAAGTGAGAGACTACTATGAGTTAGATAAGAAGATAGTGAGCCGCTACAGACAAAAGATCAAATTGGATCGAGGAAGAAAAGAGGTGACAGGCTTGGAGGCATGTAATGGTTCTCTGCCTGCTACAGGGATTGCTGTAGTGGAGCAGATGTAG 1404 0.4088 MALTLKEEDAADWVYRGEGAVNLVLAYAGSSPSFIGKVIRLRKAPNNGLESNGVSVRNSIALTPQERILWKNVDQLISSSDKEIVGQLYVEHVMKPLLGSNYVDAGMHILVTREFLELVEKNVTGQRPVWRVDAARVDTECDFGLLMSDHSLFAYGSPRPSPCISVEIKPKCGFLPFSRFISEGNAIKRRTTRFEMHQILKLHHGEISRLSEYNPLDLFSGSKERIQKAIKGLLITPQNNFRVFLNGSLILGGLGGVAKNTDVCIAKKFEDELKSVIEVDDGLCTENLLTLVTEALQKSGVLDKLLDVQKLDSIDIEGVIHAYYNITSEQCMVCKELSEEQAKIYASLHSASFDESLRIVKDYLIAATAKDCSLMLCFRPRNEEDSGMVYNNVYLESTKQAFDFKVYFIDLDLKRLSKVRDYYELDKKIVSRYRQKIKLDRGRKEVTGLEACNGSLPATGIAVVEQM* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1972 467 Pfam Inositol-pentakisphosphate 2-kinase 15 428 IPR009286 GO:0005524|GO:0035299
Vra6g1972 467 Gene3D - 1 157 IPR043001 -
Vra6g1972 467 PANTHER INOSITOL POLYPHOSPHATE KINASE 1 2 448 IPR009286 GO:0005524|GO:0035299
Vra6g1972 467 PANTHER INOSITOL-PENTAKISPHOSPHATE 2-KINASE 2 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1972 Vra-Chr6 36310274 36314490 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1972 K10572 - gmx:100127406 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1972 6 36310274 36314490 Vra6g1972 6 36310274 36314490 ECH