Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1969 ATGCAAACAGCCACAAGGAAAAAAATGGAAACCTTGGAACTCTTTCACATGAACAAAGGCGCAGGAGAAACTAGCTATGCCATGAACTCTTCCGTTCAGAACACAATTATCTCTTGTGCAGAGGCATGGAGGAAAAAAGCCATTGTTCAAATTCTGTGCACGAGTTGGCCTGAGAAGATGGGCATTGCTGATATGGGTTGTTCCTCCGGCCCTAATGCCTTGAGGGTGATTTCTGAGATCGTGGATGGCGTCTACGCCACCACGCGTCTGTTGGAGCGGCCGCCGCCGGAGTTGGTGGTGTATTTGAACGACCTCTTCGCCAATGACTTCAACAACATCTTTGCTTCATTGCCATCTTTCTACAGAAAACAAAGGCAAGAAAAGGGAAGTGGGTTTGGATCCTGTTTTGTTACAGCTGTCCCTGGCACCTTCTATGGAAGGCTTTTCCCTGCCAAGACCCTCCACTTTGTGCACTCTTCTTCCAGCCTCCATTGGCTTTCTCAGGCTCCTGTTGGATTAGAAGACGGAAGTGGAAGAGCATTGAACAAGGGAAAGATCTACATATCAAAGAGCAGTCCTCAGTGCGTGCTGGATGCTTATTCTCAGCAATTCAAGAACGATTTTTCATCGTTTATTGCTTGTCGTTCGCATGAAATGGTAACTGGGGGACGCATGGTCTTGTCTTTCATGGGAAGAACAACCATCGACCCAACTTCCGACCACAGTTGCTATCAGTGGGAACTCTTAGCACGCTCCCTTATGAGCATGGTTTCTCAGGGTCTGTTAGAAGAGAAAAAGGTGGATTGTTTTGATGCCCCGTACTACGCGCCATGCATGGAAGAAGTGAAAAAGGTGATTGAAAAGGAAGGGTCATTCATGGTAGAAGAACACGATGCTTATGAAATAGAGTGGGATGGAGGAATGGAATTGCAGAGTGATTCGAGAGGAGAGAAAGTTTCAAGAACTGCAAGGGCTGTACTTGAGTCCATGTTTGAATCTCATTTCGGACCTCACATTATGGATGAGCTTTTTCGAAGGTTTGCACAACATGTGGAAGAACATTTGTCCAACAATGACACCAAGTCCATCAATCTGGTCGTTTCCCTTGTCAAGCTATAA 1119 0.462 MQTATRKKMETLELFHMNKGAGETSYAMNSSVQNTIISCAEAWRKKAIVQILCTSWPEKMGIADMGCSSGPNALRVISEIVDGVYATTRLLERPPPELVVYLNDLFANDFNNIFASLPSFYRKQRQEKGSGFGSCFVTAVPGTFYGRLFPAKTLHFVHSSSSLHWLSQAPVGLEDGSGRALNKGKIYISKSSPQCVLDAYSQQFKNDFSSFIACRSHEMVTGGRMVLSFMGRTTIDPTSDHSCYQWELLARSLMSMVSQGLLEEKKVDCFDAPYYAPCMEEVKKVIEKEGSFMVEEHDAYEIEWDGGMELQSDSRGEKVSRTARAVLESMFESHFGPHIMDELFRRFAQHVEEHLSNNDTKSINLVVSLVKL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1969 372 Gene3D - 15 358 IPR042086 -
Vra6g1969 372 Pfam SAM dependent carboxyl methyltransferase 47 371 IPR005299 GO:0008168
Vra6g1969 372 PANTHER JASMONATE O-METHYLTRANSFERASE-LIKE 13 370 - -
Vra6g1969 372 Gene3D Vaccinia Virus protein VP39 29 359 IPR029063 -
Vra6g1969 372 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 13 370 IPR005299 GO:0008168
Vra6g1969 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 371 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1969 Vra-Chr6 36286751 36288972 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1969 K08241 - gmx:100819585 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1969 6 36286751 36288972 Vra6g1969 6 36286751 36288972 ECH