Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1857 ATGAGAGAATTAGGGTTTCAGGAACGACGCTCCTGGAGGCGCTCCGGTTCGCGAATAGGCGGCGACACCAGCCCCGACTCCGTCATCTTCACTCTCGAGTCCAACCTCAGCCTCTTCTCCTCTGCCTCCGCCAGTGTCGATCGATGTTCCTTTGCCTCCGACGCACACGACCATGACTCCTTAGCCTCCGAAATCTCCCTGCACTTGGCGGCGCAGGAGCACGACAGAGATTTCGCTCACAGCGAAAGCTGGAGCGGTCCAGATCCGGATCTGGATCAGAATAGCCGACAGCATCAACGGCGTTGCGATGCAGATTTGGATGCATTACACAGAAAGCGTCACCAAAATCCTTTCTATGGAAAAGGAGAGAAAGCGAAAGTCCAAAAGGAAGAAGATAGTGACGGTGGTGACACTGAGGACGGAAATCAGCCCTTGCAATTTGATTCTGCCAGGAACTCTTTTTCTCTGGCTCTCAAAGAGTGTCAGGATCGGAGATCAAGATCTGAGGCGTTATTGAAGAAGCACGATCGGAGAAGGCCTGCGTCGTTAGATCTGAACAATGCCGTTGGCAATGGCAATGTTTCTTCGCCTCGTTTGGGATTAGGGGCCATGAAGAAGAGCACTGTTTGTTCTCGAAGGTCTGGCTCTGGCTCTGCCAATTTTCCGAGTCCTGGAACGCCTAATTATCTTCACGCAGGTGCTGCTATGCAAAAGGGTTGGTGTTCGGAGCGAGTTCCTTTGCATACGAGTGCTGCCCGCAAGCAGGTTGGTTCTGCTCTGTTGCCTTTCAACAACGGGCGGACTTTGCCGTCCAAATGGGATGACGCTGAAAGGTGGATTCTGAGTCCCGTTTCTGGCGACAGCACTGGGAGGGCCTCGCTTCCAGCGCCGCAGAGAAGGCCCAAGTCCAAGAGTGGGCCACTTGGTCCCCCTGGCGCTGCTGCAGTTGCTTACTATTCCTTGTATTCCCCTGCGGCGCCTTTGTTTGACGGTGGGAATTCGGGGAGTTTCATGGCGGCTTCTCCATTTTCTGCTGCTGTTAGTGTCTCAGCTGCTGCTGATGGGTTGATGGCCAGTTCCGGTGGCAGTTGTGGGGAGGTCCCCACCAGGACTGATCCTTGCATGGCACGCTCAGTTAGTGTCCATGGTTGCTCTCAGATGCAGAGTCAGTCATCATTGCCTGCCCAAGGGGAGAAGTTTGATGGTTTCAAAGATGCAGGCACCAATATATCACCTGCTATTTCTAGGAGGGACATGGCAACCCAGATGAGCCCGGAGGATAGCTCATGCTCCCCTCCAAATTTGAGGCCTTCTTTCTGTGCCTCTACTCCACCTTCCCTTCCTCTATCAGAGTTCAAGAGTTTGCCTTTCTCTAAAATGGATGTCAGAGATGTACCGGTAGATGAACGTGTAACCATGACAAGGTGGTCCAAGAAACACAGGGCCCTATTCTCTGGCAGAGGCTCAGAAAATGATGACAGCTGGAAAATTAGAGAAACAAGCAGTCGATCTTCATCTTGGGACATTACTGAAGGTTCAAAGACTGTGACAAAGGCCAAAAGGGAGGAAGCCAAAATCAATGCATGGGAGAACTTGCAAAAGGCAAAAGCTGAGGCTGCTATACGGAAACTAGAGATGAAGTTGGAGAAGAAGCGAGCATCATCAATGGATAAGATTATGAACAAGCTGAGATTGGCTCAGAAAAAAGCCCAAGAAATGAGAAGTTCAGTTTCCACCAACCAGGATCATCAAGTTGCTAGAACTCCTCACAAGGCTATATTATTTAGTAGAGCCACTCAGATGGGCTCTTTGAGTGGTTGTTTCACATGTCATGCCTTTTAA 1842 0.5087 MRELGFQERRSWRRSGSRIGGDTSPDSVIFTLESNLSLFSSASASVDRCSFASDAHDHDSLASEISLHLAAQEHDRDFAHSESWSGPDPDLDQNSRQHQRRCDADLDALHRKRHQNPFYGKGEKAKVQKEEDSDGGDTEDGNQPLQFDSARNSFSLALKECQDRRSRSEALLKKHDRRRPASLDLNNAVGNGNVSSPRLGLGAMKKSTVCSRRSGSGSANFPSPGTPNYLHAGAAMQKGWCSERVPLHTSAARKQVGSALLPFNNGRTLPSKWDDAERWILSPVSGDSTGRASLPAPQRRPKSKSGPLGPPGAAAVAYYSLYSPAAPLFDGGNSGSFMAASPFSAAVSVSAAADGLMASSGGSCGEVPTRTDPCMARSVSVHGCSQMQSQSSLPAQGEKFDGFKDAGTNISPAISRRDMATQMSPEDSSCSPPNLRPSFCASTPPSLPLSEFKSLPFSKMDVRDVPVDERVTMTRWSKKHRALFSGRGSENDDSWKIRETSSRSSSWDITEGSKTVTKAKREEAKINAWENLQKAKAEAAIRKLEMKLEKKRASSMDKIMNKLRLAQKKAQEMRSSVSTNQDHQVARTPHKAILFSRATQMGSLSGCFTCHAF* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1857 613 MobiDBLite consensus disorder prediction 77 101 - -
Vra6g1857 613 Coils Coil 556 576 - -
Vra6g1857 613 MobiDBLite consensus disorder prediction 284 309 - -
Vra6g1857 613 MobiDBLite consensus disorder prediction 1 25 - -
Vra6g1857 613 Coils Coil 158 178 - -
Vra6g1857 613 MobiDBLite consensus disorder prediction 113 147 - -
Vra6g1857 613 MobiDBLite consensus disorder prediction 1 16 - -
Vra6g1857 613 Pfam Remorin, C-terminal region 499 600 IPR005516 -
Vra6g1857 613 MobiDBLite consensus disorder prediction 168 182 - -
Vra6g1857 613 PANTHER REMORIN FAMILY PROTEIN 101 611 - -
Vra6g1857 613 MobiDBLite consensus disorder prediction 485 499 - -
Vra6g1857 613 MobiDBLite consensus disorder prediction 113 133 - -
Vra6g1857 613 MobiDBLite consensus disorder prediction 168 200 - -
Vra6g1857 613 Coils Coil 534 554 - -
Vra6g1857 613 MobiDBLite consensus disorder prediction 485 507 - -
Vra6g1857 613 PANTHER OS02G0116800 PROTEIN 101 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1857 Vra-Chr6 35190226 35195167 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1857 - - gmx:100782306 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1857 6 35190226 35195167 Vra6g1857 6 35190226 35195167 ECH