Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1836 ATGGAATATCTAGGGATTGATCTTAGCTGCGCCGTGGGATCTCTCCGCCACGGCCACTTTCCGGAGAAGGATTGTTTGCTCCCTCTCATTTCCAAACTTCTCGGTTACGCCATCGTCGCTGCCTCCACAACCGTCAAACTGCCCCAGATTATGAAAATTCTGAAGCATAAGAGTGTGAGGGGCCTTAGCATGATCTCCTTTGAGCTCGAAGTTATTGGATACACCATTGCTTTGGCTTACTGTCTCCACAAAGGTCTTTCATTCTCGGCGTACGGAGAGTTGCTGTTTCTTTTGATCCAAGCTATAATATTGGTTGCTGTGATCTACTATTACTCTCGACCTTTGAGTACAATAACATGCATCCGGGCGTTGCTATATTCTGCTATAGCACCCACTATCTTTGCTGGTCAAATTGATCCTTTACTCTTTGAAGCTCTGTATGCATCCCAGCATGCAATTTTTCTCTTTGCCAGGATCCCACAAATATGGCAAAACTTTTCTAATAAAAGTACTGGGGAACTCAGCTTCTTAACTTCTTTTATGAATTTTGCTGGTTCAATGGTTAGAGTATTCACAACTATCCAAGAAAATGCACCAAACAGTGTTCTCTTGGCTATGCAATTGGAGTCGCAACAAATTTTACCATCCTAA 651 0.4301 MEYLGIDLSCAVGSLRHGHFPEKDCLLPLISKLLGYAIVAASTTVKLPQIMKILKHKSVRGLSMISFELEVIGYTIALAYCLHKGLSFSAYGELLFLLIQAIILVAVIYYYSRPLSTITCIRALLYSAIAPTIFAGQIDPLLFEALYASQHAIFLFARIPQIWQNFSNKSTGELSFLTSFMNFAGSMVRVFTTIQENAPNSVLLAMQLESQQILPS* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1836 216 Pfam PQ loop repeat 151 201 IPR006603 -
Vra6g1836 216 Pfam PQ loop repeat 30 89 IPR006603 -
Vra6g1836 216 SMART ctns 156 187 IPR006603 -
Vra6g1836 216 SMART ctns 44 75 IPR006603 -
Vra6g1836 216 Gene3D - 29 113 - -
Vra6g1836 216 Gene3D - 140 208 - -
Vra6g1836 216 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 2 208 IPR016817 -
Vra6g1836 216 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN HOMOLOG 1 2 208 - -
Vra6g1836 216 PIRSF Mpdu1 8 213 IPR016817 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1836 1 208 Miscellaneous Gene Families AT4G07390 76.923 3.37e-120 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1836 K09660 - gmx:100787632 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1836 6 34886985 34893917 Vra6g1836 6 34886985 34893917 ECH