Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1827 ATGTCAGACACCGAAACCACACCCAACCAACCCTCCTCTCCACCGCAAACGGAGGCTCCGCCGCAGCCAGACCCCTCCGCAGCTCTTTCCTTCACCATATGGCCCCTCACCGGGCGCACCCGCGATGCCATCGTTAACCGCCTCATCGAGACCCTCACCACCTCCTCCGTACTCTCCAAACGCTACGGCACTCTCTCATTCGACGAAGCCTCCGCCGCCGCTCGCCAGATCGAGGGGGAAGCCTTTTCCGCCGCGGATGCCTCCGCCGCGACCTCCGCCGATGGCATTAAGACCCTCCAGTTCTACTCCAAGGAGATCAGCAAGCGCATGCTCGACACTGTCAAGACCAGAGCTCCGCCGGGTTCCTCCGCCGTAGAGGGCGTCGCCACTGTCGTCTCCGAATAA 405 0.6296 MSDTETTPNQPSSPPQTEAPPQPDPSAALSFTIWPLTGRTRDAIVNRLIETLTTSSVLSKRYGTLSFDEASAAARQIEGEAFSAADASAATSADGIKTLQFYSKEISKRMLDTVKTRAPPGSSAVEGVATVVSE* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1827 134 Gene3D WPP domain 30 124 IPR038214 -
Vra6g1827 134 Pfam WPP domain 30 119 IPR025265 -
Vra6g1827 134 MobiDBLite consensus disorder prediction 1 29 - -
Vra6g1827 134 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 7 126 - -
Vra6g1827 134 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 7 126 IPR044692 GO:0000278|GO:0048527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1827 Vra-Chr6 34738747 34741092 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1827 - - gmx:547538 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1827 6 34738747 34741092 Vra6g1827 6 34738747 34741092 ECH
Vra6g1827 6 34738747 34741092 Vra5g1474 5 21398331 21399254 PCT