Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1738 ATGGCAATGGCAGCAACAGCCACGCGCATATCACCATTACCATCAAGAAGAAGCAGACTCACACTTTCCCCAATCCCACTGTTTCGTATTCCCACCACAACCCTAACCACTTCCTTCATATCTTTCTCTTCCACAAGCAACAGCAACAACAACAACAACAAGGCTCCCCAAACAGATTGTCCCGTTCCTCTCGAACAGCAACCCATCAACGAGTACCACTCTCTCTCCACCTCCTTCCCTTTCTCCTGGGCCGCCCTCGACGCCGTCGAATACGCCTCCCGCCTCCTCGTCACCGGGACCTCCTTCGCTCTCCTCCTCGGCCTCCCCGTCGCCTGGTTCGGCTCCGCCGGCGCCCAGGCCGAGCCCCTCAAGCGCCTCCTCTGCGCCGCCTCCAGTGGCCTCTTCGCTGTCACGCTCGCCGTCGTTAGGATGTATCTGGGCTGGGCTTACGTCGGGAACCGACTGCTCAGCGCCACCGTTGAATATGAGGAAACAGGGTGGTATGATGGTCAGATATGGGTGAAGACTGCTGAAGTTTTGGCCCGTGATAGACTCCTCGGATCATTTTCTGTGAAACCTGTACTGAGCAGATTGAAAATTACTCTTGTAAGTCTGGCAACTTCTTTACTTGTATGTGCTATTATCCTCATCAACATTGATGGGAACCAAAATCTGACATCAAAAGAACCTAGAGTTCGAGTTGTACCTGGAGTTTACAACGATGATTCTGCAAGATTATTTGAACCAGATGCTTTTCGTGATGAATCTGAACTTCAATAA 780 0.5179 MAMAATATRISPLPSRRSRLTLSPIPLFRIPTTTLTTSFISFSSTSNSNNNNNKAPQTDCPVPLEQQPINEYHSLSTSFPFSWAALDAVEYASRLLVTGTSFALLLGLPVAWFGSAGAQAEPLKRLLCAASSGLFAVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGSFSVKPVLSRLKITLVSLATSLLVCAIILINIDGNQNLTSKEPRVRVVPGVYNDDSARLFEPDAFRDESELQ* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1738 259 PANTHER OS05G0539900 PROTEIN 26 257 - -
Vra6g1738 259 Pfam Conserved in the green lineage and diatoms 27 60 203 IPR009631 -
Vra6g1738 259 PANTHER - 26 257 IPR009631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1738 Vra-Chr6 33614958 33619498 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1738 - - pvu:PHAVU_001G034900g 399.438