Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1736 ATGAGGGAAGAAAAAGAAAACCCTTCAGAGAACAGGTCCAAAGTTTCAAAATTTTCTGATCAAAACCAACCCCCAAAGCCTCAAACCACCAAGGGAACCAACCCCAACAACAACGGCTCCAAAACCAGGTTGTGGGGTGCTCACATTGTGAAGGGTTTCTCTGCTGACAAAAAAGCAAAGCCCTTTGCCACCAAAAAACAAACACTAACATCTTCAACAGCAACCTCGGAAAATGTCGTTGTTGCAAACCAGAAGAGCAACGGCAGCAACCCTTTTGTACCTTCTCATTCCAGAGTGAAGAGGTCTCTCATAGGTGACTTGTCATGTTCAATCAACCCTGCTCAGGTTCATCCTCATGCATTCCCAACTCATAGGAGACAGTCTTCCACTGATTTGTTCACTGAGTTGGACCACATGAGGGGGTTGTTGCAAGAGTCTAAGGAGAGGGAGTGCAAGCTCAATGCTGAGCTTGCAGAGTGTAGGAAGAGGGTGAGTGAGGTGGATGAGATTGTGAAGAGGGTTGGTTTGTTGGAACAGGAGAAGGCCACTCTCACTGAGCAATTGGCTGCATTGACTTGTGAGGAAGTGAAAGGGGAAGTAGAACAGCACAAGGAAGTGAAAGTGCAGAATCTTGAGCTGGAAGTTGTGGAGTTGAGGAGGCTGAATAAGGAGCTGCAGATGCAGAAACGGAACCTCACTTGCAGGCTTTCTTCTATTGAGGCTCAATCACATTGTCCTGATAAATCTTCTGAGAGTGACGTTGTTGCCAAAATTAAAGCCGAGGCATCATTGCTGAGGGTCACGAATGAAGACCTATGCAAACAAGTGGAAGGTTTGCAGATAAGCAGATTGAATGAGGTTGAAGAGCTTGCCTACTTGAGGTGGGTGAATTCATGTTTAAGAAACGAGTTGAAGAACACATGCTCAACATTGGATTCTGAGAAGCCATCTAGTCCTCACACGGTTGTGAGTAGTAGTGGAGATTGTGTAAGTTCTTTCTCTGATCAAGCCAATAGGTACTTAAATTGTGGCAGTGCAAATAGGTTCAACATGATGAAGAAGCCAAAAAAGTGGACCATAGCATCACAAGAAGAGTTTCAAGGCAGTCTCATTGAGAAAAATTGTATTGAATCAGATGTTGCAGGAGGAAGCCCCAGAAGAAGGCACTCTATCAGTGGATCAAACTACTCAGAGGAAGAGGTTGTTTTGAGTAAGAGAAGACAGTCTGATTGTTTTGTATGTTCAAAGGAAATGGACAAGGAATCAGTGTCATTGTCTTTTCAACAATCTGGTGTGGAGATTGTCCAAAGACCACAATATTTTGGAATTTCCCAAGAAACTAACAAGCTTTTGGTTTCTTCAGATGTTGAGAAAAGGGCCCTACGCATTCCTAATCCTCCTCCAAGGCCTTCATGTTCTATTTCAAGCAAAATAAAACAAGAAAGTTCTGCTCAAGTTCTACCTCCCCCACCTCCACCTCCTCCCCCACCTCCTATGAATTTTGCATCAAAAAGTAACACAGCAACTGTGAAAAGAGCCCCCCAAGTGGTGGAATTGTATCATTCACTTATGAAGAGAGACTCTAGAAAGGATTCTTCAAATGGAGGACTATCTGATGCACCGGATGTTGCTGATGTTCGTAGCAGCATGATTGGAGAAATTGAAAACCGTTCATCACACTTGCTTGCTATAAAGGCAGATATTGAGACTCAGGGAGAATTTGTAAATTCATTGATTAGAGAGGTGAAGAACGCAGTTTATCAGAACATAGAAGATGTAGTGGCATTTGTGAAGTGGCTAGATGATGAACTGTGTTTCCTTGTTGATGAGAGGGCAGTCCTTAAGCATTTTGATTGGCCAGAGAAGAAAGCCGACACATTAAGAGAAGCAGCATTTGGGTATCAAGATTTGAAGAAATTAGAATCTGAAGTTTACTCCTACAAGGATGATCCTCGTCTACCCTGTGATATTGCTCTAAAGAAAATGGTTGCATTGTCTGAAAAGATGGAGCGTACAGTTCATAACCTTCTTCGCACAAGAGAGTCACTAATGCGTCACTGCAAGGAGTTTCAAATTCCCATAGAATGGATGCTTGACAATGGAACTATTGGCAAGATAAAGCTAAGCTCAGTTAAATTGGCTAAAAAGTATATGAAAAGGGTAGCTATGGAACTTCAGGTAAAATCAGCATTAGAAAAAGATCCTGCAATGGATTACATGCTTCTCCAAGGAGTGAGATTTGCTTTTCGAATCCATCAGTTTGCTGGAGGATTTGATGCAGAAACAATGCATGCATTTGAGGAGCTTCGCAATCTGGCTTCTCTTCTTAACAAAACATAA 2340 0.4256 MREEKENPSENRSKVSKFSDQNQPPKPQTTKGTNPNNNGSKTRLWGAHIVKGFSADKKAKPFATKKQTLTSSTATSENVVVANQKSNGSNPFVPSHSRVKRSLIGDLSCSINPAQVHPHAFPTHRRQSSTDLFTELDHMRGLLQESKERECKLNAELAECRKRVSEVDEIVKRVGLLEQEKATLTEQLAALTCEEVKGEVEQHKEVKVQNLELEVVELRRLNKELQMQKRNLTCRLSSIEAQSHCPDKSSESDVVAKIKAEASLLRVTNEDLCKQVEGLQISRLNEVEELAYLRWVNSCLRNELKNTCSTLDSEKPSSPHTVVSSSGDCVSSFSDQANRYLNCGSANRFNMMKKPKKWTIASQEEFQGSLIEKNCIESDVAGGSPRRRHSISGSNYSEEEVVLSKRRQSDCFVCSKEMDKESVSLSFQQSGVEIVQRPQYFGISQETNKLLVSSDVEKRALRIPNPPPRPSCSISSKIKQESSAQVLPPPPPPPPPPPMNFASKSNTATVKRAPQVVELYHSLMKRDSRKDSSNGGLSDAPDVADVRSSMIGEIENRSSHLLAIKADIETQGEFVNSLIREVKNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFDWPEKKADTLREAAFGYQDLKKLESEVYSYKDDPRLPCDIALKKMVALSEKMERTVHNLLRTRESLMRHCKEFQIPIEWMLDNGTIGKIKLSSVKLAKKYMKRVAMELQVKSALEKDPAMDYMLLQGVRFAFRIHQFAGGFDAETMHAFEELRNLASLLNKT* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1736 779 Coils Coil 167 194 - -
Vra6g1736 779 PANTHER PROTEIN CHUP1, CHLOROPLASTIC-LIKE 1 779 - -
Vra6g1736 779 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 779 IPR040265 -
Vra6g1736 779 MobiDBLite consensus disorder prediction 1 42 - -
Vra6g1736 779 MobiDBLite consensus disorder prediction 14 42 - -
Vra6g1736 779 SUPERFAMILY Formin homology 2 domain (FH2 domain) 488 498 - -
Vra6g1736 779 MobiDBLite consensus disorder prediction 461 504 - -
Vra6g1736 779 Coils Coil 201 242 - -
Vra6g1736 779 MobiDBLite consensus disorder prediction 485 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1736 Vra-Chr6 33597585 33603140 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1736 - - gmx:100818641 1311.59