Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1727 ATGCTTCAGGAAGCAGTCTCATCCTCCCCGACATTCTTAGCCACCCTTTACAGCTGGTTCACACCCACCGTCTTCTTCCTCCTCCTCCAACTAGTCATCGGAACCATCTTCATCATCTCCAACCTTGCCAGCTCCAAACACCACCAACACCAACACCAAGACCCTCATGCCCAACATCATCAAGCTAATGACTTTCCACACCCACACCTCCCTAGATCCCCTTCCATCTTGCAGAGACTCAAATCCATCAACTTCTACCCCTCCCAAGACCCTCCACACCCACACTTTCATGAATCTCAAACCCATCAAAACGAAACCTTCCAACTTGCTAGATCTCCTTCGCTCCTTCAAAGACTCAAATCCATCAACCTCTACACTTACCTCCCCACCGAACCCTTCACTTCAAAACTCACTCCCCAAGTTCCCCAAGTTCCCCAAGCAGTCACACTTTCCCACGCGCCGGACAAACCCCACTTGCCGCCACCCCAGGTGGTCGAAACCGACGAGGAAAAAGAGGAAGACGATGACTTTCCTGTCGTGAGCGGTGGTTACGACTACAGCCTTGGAGACCGCGAAGAGGGTTCTTCCCTGGACGAGATTTACAGCAAATTGCAGCAGCAGGGGCAAGATGGTCATTTCACTAGGACACACTCTGACACCAAGCCTTCTTCTGGTGAGGTTCCGGTGAAACTGCCGCGGAAGATGAAAAAGTCAGCAAGCAGCAAGTCTGCCTTTGCACACTTCAAAGAAGAGGACATCGTGGAGAACCGCCGCCCGGCCACGGTGAGGGAGGCTAAGGTGAGCGGTGCCCCAGTCGACGACGAGGTGGACGCCAAGGCCGACGATTTCATCAACAAGTTCAAGCAGCAGCTGAAGCTGCAGAGGCTGGATTCCATCATGAGGTACAAGGAAATGATTGGCAGAGGATCTGCCAAATAA 939 0.5261 MLQEAVSSSPTFLATLYSWFTPTVFFLLLQLVIGTIFIISNLASSKHHQHQHQDPHAQHHQANDFPHPHLPRSPSILQRLKSINFYPSQDPPHPHFHESQTHQNETFQLARSPSLLQRLKSINLYTYLPTEPFTSKLTPQVPQVPQAVTLSHAPDKPHLPPPQVVETDEEKEEDDDFPVVSGGYDYSLGDREEGSSLDEIYSKLQQQGQDGHFTRTHSDTKPSSGEVPVKLPRKMKKSASSKSAFAHFKEEDIVENRRPATVREAKVSGAPVDDEVDAKADDFINKFKQQLKLQRLDSIMRYKEMIGRGSAK* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1727 312 PANTHER COTTON FIBER (DUF761) 1 89 - -
Vra6g1727 312 PANTHER COTTON FIBER (DUF761) 98 311 - -
Vra6g1727 312 MobiDBLite consensus disorder prediction 150 192 - -
Vra6g1727 312 Pfam Cotton fibre expressed protein 273 307 IPR008480 -
Vra6g1727 312 MobiDBLite consensus disorder prediction 87 108 - -
Vra6g1727 312 MobiDBLite consensus disorder prediction 206 227 - -
Vra6g1727 312 MobiDBLite consensus disorder prediction 48 66 - -
Vra6g1727 312 MobiDBLite consensus disorder prediction 48 73 - -
Vra6g1727 312 PANTHER OS06G0566500 PROTEIN 98 311 - -
Vra6g1727 312 PANTHER OS06G0566500 PROTEIN 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1727 Vra-Chr6 33506634 33507846 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1727 - - gmx:100775337 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1727 6 33506634 33507846 Vra6g1727 6 33506634 33507846 ECH