Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1726 ATGGACCCTCCCGCAACCTACATTTCCTCATCCCAACTCCGCAAACACAACACGCGCCATGACGCGTGGATCTCAATCCATGGCAAAATCTACGACGTCTCCTCCTGGCTCCACCGCCATCCCGGCGGCGCCCTCCCTCTTCTCACCGTTGCCGGCACAGACGCCACTGATGCCTTCCTCGCCTTCCACCCGCCCTCCGCCGCCGCCTCCCTCCTCCCCTCATTCTCCACTGGCCTCCTCCTCTCTGACTACGCCGTCTCTGCCGCCTCCTCCGACTACCGCAAGCTCCACTCCAAGCTCTCCGAACTCAACCTCTTCGAACGCAAGGGCCACACCACCCTCATCCTGCTCTCCCTCATCCTCACCCTCCTCCCTCTCTGCGTCTGCGGCGTCGTCTTCTCCGACAGCACATGTGTGCACTTGCTCTCTGGCGCCTTGATCGGCTTCCTCTGGATTCAGAGCGGCTGGATTGGCCATGACTCCGGCCACTACAACGTCATGCTCAACCGCCGCTTTAACCGCGTAGCGCAGATCCTTTCCGGCAACGTTCTCGCCGGAATCAGCATTGCCTGGTGGAAGTGGAACCACAACGCGCATCACATTGCGTGCAACAGTCTCGACTTCGACCCCGATCTTCAGCACCTACCCTTCTTCGTGGTCTCCTCTAAGTTTTTCAACTCTCTGACTTCCCAATTTTACGATAGAAAGCTCAATTTCGATTCCCTCGCTAGGTTTTTGGTCAGTTATCAGCATTGGACTTACTACCCCGTCATGTGCTTCGCCAGGGTTAACCTTTTTGCTCAGTCTTTTTTCCTTTTGTTGTCGAACAGAAAAGTGGAGAGCAGAGGAATTGAGCTTTTAGGGTTGCTTGCGTTTTGGGTTTGGTACCCTTTGTTGGTCTCTTTTTTGCCAAATTGGTGGGAGAGGGTTTTGTTCGTTGTGGCAAGTTTTTCTGTGACGGGTATTCAGCATGTGCAGTTTTGCTTAAACCATTTCTCTTCTAAAGTTTACCTTGGTCCTCCAAGTGGTGGTGATTGGTTTGAGAAGCAGACTAATGGTACCCTTGATGTCAGCTGTTCTGCTTGGATGGACTGGTTTCACGGTGGCCTGCAGTTTCAGGTGGAGCACCATTTGTTTCCCCGGCTACCGCGCTGCCATCTGAGGAAGATCGCGCCTTTGGTTAAGGATCTGTGCAAGAAGCATAACCTTCCCTACAATTGTGTGTCCTTTTGGAAGGCCAATGTGCTCACTATTCAGACACTGCGAAACGCGGCGTTGCAGGCCAGGGATGGATCTGGGCCGGCTCCAAAGAATTTGGTTTGGGAGGCTGTTAACACCCATGGATGA 1347 0.5382 MDPPATYISSSQLRKHNTRHDAWISIHGKIYDVSSWLHRHPGGALPLLTVAGTDATDAFLAFHPPSAAASLLPSFSTGLLLSDYAVSAASSDYRKLHSKLSELNLFERKGHTTLILLSLILTLLPLCVCGVVFSDSTCVHLLSGALIGFLWIQSGWIGHDSGHYNVMLNRRFNRVAQILSGNVLAGISIAWWKWNHNAHHIACNSLDFDPDLQHLPFFVVSSKFFNSLTSQFYDRKLNFDSLARFLVSYQHWTYYPVMCFARVNLFAQSFFLLLSNRKVESRGIELLGLLAFWVWYPLLVSFLPNWWERVLFVVASFSVTGIQHVQFCLNHFSSKVYLGPPSGGDWFEKQTNGTLDVSCSAWMDWFHGGLQFQVEHHLFPRLPRCHLRKIAPLVKDLCKKHNLPYNCVSFWKANVLTIQTLRNAALQARDGSGPAPKNLVWEAVNTHG* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1726 448 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 6 447 - -
Vra6g1726 448 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Vra6g1726 448 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Vra6g1726 448 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Vra6g1726 448 SMART Cyt_b5_2 8 81 IPR001199 -
Vra6g1726 448 CDD Delta6-FADS-like 141 403 - -
Vra6g1726 448 Pfam Fatty acid desaturase 140 407 IPR005804 GO:0006629
Vra6g1726 448 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Vra6g1726 448 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 83 IPR036400 -
Vra6g1726 448 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 77 IPR001199 -
Vra6g1726 448 PANTHER FATTY ACID DESATURASE 2 6 447 IPR012171 GO:0016491
Vra6g1726 448 PIRSF FA_sphingolip_des 2 436 IPR012171 GO:0016491
Vra6g1726 448 Gene3D - 5 99 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1726 Vra-Chr6 33480994 33483103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1726 7 448 Lipid Metabolism Gene Families AT2G46210 61.538 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1726 K21737 - gmx:100776476 809.29