Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1710 ATGAATAACGATTTCGTTTGGCTGCCGTCGCTGTATTCGGATCCCGAAGTGTTCACCTATTTGGAGCCATTCATGCTCCGCAATTCTGTGAGCTCGCGCTTCATGCATTCGCTGGCCAACAATCCCGGAAGTTTCGCGATCGGAGAAGCCTTCGGACACGTGTCGAGGTTCGCCGGCGCGTTTCTGGTGTGGCTCTCACGCGCGTCCACTTTCAATGTGCCGTGTTCCCTGCGCGGCTCTCCTCCACGGTTTGGTAGTGCGCAGGTTAAGGCCGTGGCGACGAATGTGAGTCTGTTTGGGTTTCCGTTTCGATCGAAGAGGAAATCGTTTGAGTCTGTCAAGTTAGGAAAGATATCGAGTTTCGCGATGAAGATGATTTGGAGTGAAGCGAAGAGGCTTCGGTCGTTACCTATTCTGTCGCTGGCTGCTGCGTTGGTTCCACCTTTTCAAAACTTGTCATCGAATGTTCTAGCTAGCCCATTGCAGAGTCCTGATATGCAAATGTATGGAACCATTGACCAAGTGCCCAGGGAGGTTGAATGCCAAGGGTGTCCGTTCCTGTCCTATCTCGAGTTGAACCAATCCAAACCTGCAGTTGAGCCTAAAACTGGCATTGAATTTCCCTTGGTTCTAGACAATATATTTGCTGGAGAGAAGGATTTTGGCTTCAACTCTGAGGTCCTGGTTGGAACAGGATCCAGAACCATGACAATTGTTAAAATCAAGTCACTGAAAGTCTATGCTTTTGGAGTTTATATTCATCCGTACTCCCTCTGTAAGAAATTGGGGCCAAAATATGCATCAATATCTGCTGATGAACTGAATAACCATCACGAATTCTACCGGGATCTTCTCAGGGAGGATATCAATATGACTGTTAGACTTGTTGTAAATTGCAGGGGTATGAAGATTAACAGTGTGAGAAATGCTTTTGAAAAATCACTTCGAGCTCGTTTAGTAAAGACAAATCCTTCCACGGACTTTCATTGCCTAGAGACATTTGGTTCATACTTCGAAGAGAATATCTCAATACCTTTGGGAACAGTAATTGAGTTCAAACAAACAGTTGATGGGCGTCTGATCACTAAAATTGGTGAAAATCAGATAGGAAGTGTCCACAGCAAAGATTTGTGCCGGGCTTTCTTTGACATGTACATTGGAGATGTTCCTGTGTGCGAAGAAACTAAAAAAGAGATCGGCACGAACATAGCGAGTATCATTAGGAGGTGCTAA 1233 0.4558 MNNDFVWLPSLYSDPEVFTYLEPFMLRNSVSSRFMHSLANNPGSFAIGEAFGHVSRFAGAFLVWLSRASTFNVPCSLRGSPPRFGSAQVKAVATNVSLFGFPFRSKRKSFESVKLGKISSFAMKMIWSEAKRLRSLPILSLAAALVPPFQNLSSNVLASPLQSPDMQMYGTIDQVPREVECQGCPFLSYLELNQSKPAVEPKTGIEFPLVLDNIFAGEKDFGFNSEVLVGTGSRTMTIVKIKSLKVYAFGVYIHPYSLCKKLGPKYASISADELNNHHEFYRDLLREDINMTVRLVVNCRGMKINSVRNAFEKSLRARLVKTNPSTDFHCLETFGSYFEENISIPLGTVIEFKQTVDGRLITKIGENQIGSVHSKDLCRAFFDMYIGDVPVCEETKKEIGTNIASIIRRC* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1710 410 Gene3D - 257 400 IPR016089 -
Vra6g1710 410 SUPERFAMILY Chalcone isomerase 201 408 IPR036298 GO:0016872
Vra6g1710 410 Pfam Chalcone isomerase like 227 399 IPR016087 GO:0016872
Vra6g1710 410 PANTHER FATTY-ACID-BINDING PROTEIN 2 38 410 - -
Vra6g1710 410 PANTHER FATTY-ACID-BINDING PROTEIN 2 38 410 - -
Vra6g1710 410 Gene3D - 199 385 IPR016088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1710 Vra-Chr6 33293122 33299100 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1710 - - gmx:100803025 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1710 6 33293122 33299100 Vra6g1710 6 33293122 33299100 ECH