Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1705 ATGAAGCTTTGGTGCTGTCTATGCTTCACTGAAGAGGAACAAGATAACCTAAACTTCATGAAGGAAGAGGACATTTCCGAAAACGACGTCGTTCCCGGCGTTGGAGCTGCTGCTCTCGCTGACCACCACGCTGACGACAACCGCGACGATGACCGATTCGCGATGACGCCAGTGCAGCCGCGCGCCGAGGCATTGGTCTCGTGGACCGGCGAGTGCAGCGCCGCCGCGTGCTCGGACAGCACCGTCGCAGGCAGCGTCGAGAGCCGCGATTTGAGCCATAAGCGCGCCAAGTTCTACGCCGATTTCGAGGAGCGGTACTTTTCGACGAATGCAGGGAAATGCAGTGCATCTAATGAATATGGAGACTATGACTTCATTAACGATTCTCTTCGACCCAACGGTGAGACTTTCTGTGATACATTTGCATTGATGGGTGGTGGTGAGGAGAGTGGTTTTGATTCCAGCATCGTGGAAGACGGTGAAGGAGATAATAGTGATATCTTGAAAGTGGAAGATGTAGAGGTCAGAATGGATCTCACCGATGACTTGTTGCATATGGTTTTCTCGTTTTTGGATCATCCCAATCTCTGCAAAGCTGCCAGGGTTTGTAAACAGTGGCGAAGTGCAAGTGCTCATGAAGATTTCTGGAAAAGCTTGAACTTTGAAGATCGTAACATCTCTGTCGAACAATTTGAGGACATGTGTAGGCGTTATCCCAATGCCACAGCAGTGAGCATATCTGGTTCTGCTATTTACTTGCTTGTCATGAGGGCCATCTCTTCATTAAGGAATCTTGAGGTTCTAACATTAGGAAGAGGACAAATAGCTGATACTTTTTTCCATGCTTTAGCTGATTGTNCTATGTTAAAAAAGTTGAATATAAATGATTCTACACTTGGCAATGGCATTCAAGAGATAACTATAAATCATGACAGATTGTGTCATCTTCAATTAACAAAATGCCGTGTGATGCGAATAGCAGTCAGGTGCCCACAACTGGAAACTATGTCATTGAAGCGCAGTAACATGGCACAGGTTGTACTCAATTGTCCACTTTTGCATGAGCTTGATATAGGCTCTTGCCACAAACTTCCTGATGCTGCAATACGAGCTGCTGCAACTTCATGCCCTCAACTTGTTTCACTGGACATGTCAAATTGTTCTTGTGTCAGTGATGAAACTCTGCGTGAAATAGCATTGAGTTGTGCTAGCCTTAGTTTTCTTGATGCATCGTACTGCCCAAACATTTCTCTGGAGTCTGTTAGACTGCCGATGTTGACAGTTCTAAAGCTTCATAGTTGTGAGGGGATCACTTCTGCCTCAATGGCTGCAATAGCTCATAGTGATATGTTGGAGGTTTTGGAGCTTGATAATTGTAGCCTTCTGACATCAGTGTCATTGGATCTTCCCCGTTTGCAGACTATTAGATTGGTACACTGTCGCAAGTTTGCCGATTTAAACTTGAGGACTATGATGCTTTCTAATATTCTGGTATCAAACTGTCCTGCACTTCATCGTATCAATATCACTTCAAATTCACTTCAAAAACTAGCATTGCAAAAGCAAGAAAGTTTAACCACCTTAGCTCTACAATGTCAATCTTTACAAGAAGTGGACCTCTCAGAGTGTGAATCTTTGACAAACTCTATATGTGATGTTTTTAACGATGTTGGAGGATGCCCTATGCTGAAATCACTAGTTCTAGCTAATTGTGAGAGCTTGACTTCGGTTCGGTTCTTCAGCACCTCTTTGGTCAGTCTTTCCCTTGCTGATTGTCGGGCAATCACTACTCTGGAGCTCACATGCCCCAACCTTGAGAAAGTCATTTTGGATGGTTGTGATCATTTAGAAAGAGCATCCTTTTGTCCTGTTGGTCTTCGATCTCTCAATTTAGGAATATGTCCAAAATTAAATATACTCAGCATAGAAGCCACGGTTATGGTCTCACTTGAGTTGAAAGGATGTGGTGTACTGTCTGAAGCATCAGTTAATTGTCCTCTCTTGACATCTTTGGATGCTTCATTTTGCAGCCAACTCACTAATGAATGCTTGTCTGCTACAACTGCCTCTTGCCCAATGATTGAATCATTAATATTGATGTCATGCTCATCGATTGGTTTGGATGGACTGTGCTCTTTGCAGCGGCTCCCAAATTTGACCCTACTTGATTTATCGTATACCTTTTTGGTCAATTTGCAGCCTGTTTTTGAGTCTTGCACACAGCTAAAGGTATTAAAGTTGCAGGCATGCAAATATCTCACTGACTCATCACTTGAGCCCCTCTACAAGAGGGGAGCTTTACCAGCACTTCAGGAGTTAGACTTGTCTTATGCTACACTATGTCAGTCTGCTATAGAGGAGCTTCTTTCTTGCTGCACACACCTTACACATGTCAACTTGACTGGCTGTGCCAATATGCACGACTTAAATTGGGGATGTAGTCGTGGGCATATTGCTGGTGTAAATGTGCTATCTATTACAAGTTCTTATGAAAATGTCCATGAGCTAAGTGAGCAACCCACTCGACTACTGCAGAACTTAAACTGCGTGGGATGTCTGAACATTCGGAAAGTTTTCATTCCATTAACGGCACATTGTTCCTGTTTGTTGTTTTTAAACCTTTCTCTATCAACGAATTTGAAAGAGGTTGATGTTGCATGTCTCAACCTAAGCTGGCTTAATCTAAGCAATTGTTACTCTTTGGAAGTTTTGAAGCTAGATTGTCCAAGATTGACCAGTCTATTCCTCCAGTCTTGCAACATTGACGAAGAAGCAGTAGAGACTGCTATATCCAAATGCTGCACTATGCTGGAGACTCTTGATGTTCGCTTCTGTCCAAAGATTAGCTCAATGAGCATGGGAAGATTGCGTGCAGCATGTCCTAGTTTGAAGCGTATATTCAGCAGCTTGTCAACTTCATAA 2922 0.4343 MKLWCCLCFTEEEQDNLNFMKEEDISENDVVPGVGAAALADHHADDNRDDDRFAMTPVQPRAEALVSWTGECSAAACSDSTVAGSVESRDLSHKRAKFYADFEERYFSTNAGKCSASNEYGDYDFINDSLRPNGETFCDTFALMGGGEESGFDSSIVEDGEGDNSDILKVEDVEVRMDLTDDLLHMVFSFLDHPNLCKAARVCKQWRSASAHEDFWKSLNFEDRNISVEQFEDMCRRYPNATAVSISGSAIYLLVMRAISSLRNLEVLTLGRGQIADTFFHALADCXMLKKLNINDSTLGNGIQEITINHDRLCHLQLTKCRVMRIAVRCPQLETMSLKRSNMAQVVLNCPLLHELDIGSCHKLPDAAIRAAATSCPQLVSLDMSNCSCVSDETLREIALSCASLSFLDASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAIAHSDMLEVLELDNCSLLTSVSLDLPRLQTIRLVHCRKFADLNLRTMMLSNILVSNCPALHRINITSNSLQKLALQKQESLTTLALQCQSLQEVDLSECESLTNSICDVFNDVGGCPMLKSLVLANCESLTSVRFFSTSLVSLSLADCRAITTLELTCPNLEKVILDGCDHLERASFCPVGLRSLNLGICPKLNILSIEATVMVSLELKGCGVLSEASVNCPLLTSLDASFCSQLTNECLSATTASCPMIESLILMSCSSIGLDGLCSLQRLPNLTLLDLSYTFLVNLQPVFESCTQLKVLKLQACKYLTDSSLEPLYKRGALPALQELDLSYATLCQSAIEELLSCCTHLTHVNLTGCANMHDLNWGCSRGHIAGVNVLSITSSYENVHELSEQPTRLLQNLNCVGCLNIRKVFIPLTAHCSCLLFLNLSLSTNLKEVDVACLNLSWLNLSNCYSLEVLKLDCPRLTSLFLQSCNIDEEAVETAISKCCTMLETLDVRFCPKISSMSMGRLRAACPSLKRIFSSLSTS* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1705 973 Gene3D Ribonuclease Inhibitor 729 902 IPR032675 -
Vra6g1705 973 Gene3D Ribonuclease Inhibitor 583 728 IPR032675 -
Vra6g1705 973 Gene3D Ribonuclease Inhibitor 171 421 IPR032675 -
Vra6g1705 973 Gene3D Ribonuclease Inhibitor 422 582 IPR032675 -
Vra6g1705 973 ProSiteProfiles F-box domain profile. 173 219 IPR001810 GO:0005515
Vra6g1705 973 SUPERFAMILY L domain-like 515 646 - -
Vra6g1705 973 Gene3D Ribonuclease Inhibitor 903 971 IPR032675 -
Vra6g1705 973 SUPERFAMILY F-box domain 177 228 IPR036047 GO:0005515
Vra6g1705 973 SMART fbox_2 179 219 IPR001810 GO:0005515
Vra6g1705 973 PANTHER OS10G0396666 PROTEIN 86 933 - -
Vra6g1705 973 SUPERFAMILY RNI-like 218 481 - -
Vra6g1705 973 PANTHER OS10G0396666 PROTEIN 86 933 IPR044703 GO:0010252|GO:1905393
Vra6g1705 973 SMART LRR_CC_2 560 590 IPR006553 -
Vra6g1705 973 SMART LRR_CC_2 739 764 IPR006553 -
Vra6g1705 973 SMART LRR_CC_2 934 959 IPR006553 -
Vra6g1705 973 SMART LRR_CC_2 532 556 IPR006553 -
Vra6g1705 973 SMART LRR_CC_2 792 827 IPR006553 -
Vra6g1705 973 SMART LRR_CC_2 602 627 IPR006553 -
Vra6g1705 973 SMART LRR_CC_2 350 375 IPR006553 -
Vra6g1705 973 SMART LRR_CC_2 767 791 IPR006553 -
Vra6g1705 973 SMART LRR_CC_2 376 401 IPR006553 -
Vra6g1705 973 SMART LRR_CC_2 908 932 IPR006553 -
Vra6g1705 973 SMART LRR_CC_2 423 448 IPR006553 -
Vra6g1705 973 SMART LRR_CC_2 469 494 IPR006553 -
Vra6g1705 973 SMART LRR_CC_2 665 690 IPR006553 -
Vra6g1705 973 SMART LRR_CC_2 691 716 IPR006553 -
Vra6g1705 973 Pfam F-box-like 181 221 IPR001810 GO:0005515
Vra6g1705 973 SUPERFAMILY RNI-like 626 967 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1705 Vra-Chr6 33192637 33203796 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1705 - - gmx:100782842 1642.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1705 6 33192637 33203796 Vra6g1705 6 33192637 33203796 ECH