Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1695 ATGGATTTCAGAGTTGTGGGTTTGGAATCTCCATTTTTCCAGTCGCTGCGCAGCATGATGGACATGTCGGACGAGGGTGCAGGGGAGAGCACACACAATGCTCCGACACAGACATACGTGCGAGACGCGAAAGCGATGGCTGCAACAGCTGCGGATGTGAAAGAATATCCGAATTCCTACGTATTCCTGATAGACATGCCGGGGTTGAAATCTGGTGACATAAAGGTTCAGGTTGAAGATGATAACGTGCTTTTGNTTAGCGGGGAGAGAAANAGGNAAGAAGAGAAAGAAGGGGTGAAGTATCTGAGAATGGAACGAAGAGTTGGGAAATTCATGCGGAAGTTTGTTTTACCTGAAAATGCAAACACTGATGCAATTTCTGCTGTGTGTCAAGATGGGGTCCTTAGTGTTACTGTGCAGAAATTGCCTCCTCCTGAACCTAAGAAGCCTAGAACTATTGAAGTGAAGGTTGCTTGA 477 0.4612 MDFRVVGLESPFFQSLRSMMDMSDEGAGESTHNAPTQTYVRDAKAMAATAADVKEYPNSYVFLIDMPGLKSGDIKVQVEDDNVLLXSGERXRXEEKEGVKYLRMERRVGKFMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIEVKVA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1695 158 SUPERFAMILY HSP20-like chaperones 33 150 IPR008978 -
Vra6g1695 158 Gene3D - 5 157 IPR008978 -
Vra6g1695 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 9 157 - -
Vra6g1695 158 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
Vra6g1695 158 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 9 157 - -
Vra6g1695 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 158 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1695 Vra-Chr6 32995584 32996304 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1695 K13993 - gmx:100813195 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1695 6 32995584 32996304 Vra6g1695 6 32995584 32996304 ECH