Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1688 ATGATGAAATCTATGTTTGAGTGTGGAAACCAAGATGCTAATGTTGATGATGGAGACCTTAATTGGAATAATGGTCATCTCCTACTGCAAGACATTCAAGAAATAAGCAAAGCCCTCTATGCTCCTTCTAGGCCTTCCTTTTCCTCTGTTCATAATCGATCCAAATCTGCAGGAAAAACCCGGTTGTCGAAATCTCAAGTTGCCTTAACCCCGGGATTTCTGAAGGATGATCTGTTGTCTAAGGACAAGAAGTTGTCTTCTGCGTGGAATTGGAAGAAGCCCTTGAAAGCTTTGACCCATATTGGTGATCAAAAGATCAAATGTTGCTTTAACCTTCATGTTCACTCAATCGAGGGTCTGCCTTTGAGTTTTGATAGCATTAGGCTGTGTGTGGTTTGGAAAAGAAAAAGCAACATTTTGCAGACTCGCCCCTCAAGGGTTATCCAGGGTGTTGTGGAGTTCAATGAAACTTTGAGTCATGGATGTTCTGTTTATGTTAGCCGCGCTGTCTCTGGTCATTCTCTCAAGTATGAGTCTAAGCGGTTCTTGATTTATGCCTTCATTGTGGGGGCACCAGAACATGACATAGGGAGCCATCAGGTGGATCTCACTAGACTCTTACCTCTGACTTTGGCAGAGTTAGGGGGTGATAGAAGTTCAGGGAAATGGAGCACAAGTTTTAGGTTGGCAGGAAAAGCTGTGGGAGCTAGCCTAAATGTTAGTTTCAGCTATCAAATAGTGAAGGATGAGTTAACGCAATTTGGTGGCGATAATTTGAATGTTCTCAACCTTATTAATATGAAGCCAGGCAGGCCAAGCAGCACAAGTATGAATTTTGGTCCAGGCCCTTTTCATTCTGATGATGCGATTTTATCCCGGGAAGCATTGATGAATTCTGGCTCAAGTCTTTCCAAATCAATCAGTTTCCTTTATCAAAAACTTGATGAGGAGAACATCCATGATTCAGGACAGGCAGACTCGGAACATTTTGAACCACTTAAATCTCATGTCATAGAATCAAAGTCACCTCAAGAATCAAATTTTGAAGCTGATGACACTGAAATTTCCATTATAGAACAAGTAGAAACATTGGAAGGGGATCCCTTGAAAAATGATCAGGCAGGAAATCAAACAGTTGATTTGTCAACAGTTGAAATCATTAATGTAGATGATATTATTAAGGATGATGACATATCTGTTGACAAGAACACAAGTTTTGATTCAATGGATGACATATACACTAGTTGTGTAAATGGAACTGTGGCAGGTGACAGCAAACATAAATGCAGTAGTTCGTGTCTCAGTTTAACTTGCATCAAGGATGTAGATATACTTCCTGAGACATCAGAGTTTCTTGACCAAGAGCACTACCCTATTGTTAAATCAAATTATAAATCACATAGAATGGCAAAAAAATCAAGTAGCTTGGATTCTATCACCGAATCTATTGCAAATGATTTCTTGAACATGCTGGCCATAGAGAGTGGTTCATTTGGCTCAAGTCGTGACGGGGATCCACATTCTCCCAGAGAGAAGCTTTTAAGACAGTTTGAAAAGGAGGCTCTAGCTTCAGGTAACTTCACTTTTGATTTCAATGCAAATGAAGAGGAATTGAAGACGGAGACGCTTGGACATAGCTATGACGATTGTACTGTGGATTCTGATTTGTCATTATTTATTCAAGCTGCTGAAGAGGAGCATGCCAGGGAGAATCAGTTGTTAATGCAGAGAAGAAAGGCCAAAATTTTGGAAGACCTGGAGACAGATTCATTGATGCAACTCTGGGGTTTAAATGAGAGGGACTTTGAAAATTCTCCGGGAACTTGCTCTGGTGGGTTTGGAAGTCCAATTGAACTACCCAATGAAGAATCATGCATGTTACCTTCAATTGGACAGGGACTTGGTTCATTTGTTCAAATTATGGGTGGAGGCTTCTTAAGGTCCATGAGTCCTTCCCTTTTCAAAAATGCTAAGAATTGTGGTAACCTCATCACTCAGGCTTCTAATCCTGTTGTTCTACCTGCAGAAATGGGTAATGATATACTGGATATACTGCAGCATGTGGCATCTGATGGAGTTGAAGAGCTGTGTCATCATATCTATAAATTGTTGCCTTTGCAAGATATCACTGGAAAATCCATTGAGCATATTTCTTGGGAAGCCATAACCAACAAAGGGACTCCTGAAAGGCAGGGGACATGGCAGCACGATTCCTTTGATGAATTTCATTGTAACTATTTGACAGATGAAGGCATGAGCTTGGACACTGTATCTCTAGAAGCAATAGCTCCTATGACTGTTGATAAGATTGAAACCCTTTTGATAGAAGGGTTGAGAGTGCAGTCTGGCATGTTGTACGAGGAGGCACCATCTTATATGCTTCCCCAACATGCCAAGACGCCTTTCATCGGTAGCAGAAGAGCCAACTGGAAATGGTTTCCCACATCAGAAAGAGGTGATAAAATGAAACTAGAAGATGGTGGAGAAATTGGTCATGATGATCATGGATTGATGGGGCTGTCAGTAACATTAGATCAGTGGTTGAGATTGGATTCTGGCATTATTGAAGGAGATCAAAATTCAGAACAAATTTTGAAGATCTTACAAGTACACCATTCTAAAATCACAGAGTTACTGCATGATGGAGGGTTGAAAAATGCCATGGACCAGGTAAAAGCATTTGGCAGAAAGCATGGACTCTTGGGGAACCACCTAACGGTGGCTTATATGATCCAGCTTAGGAATCCGCTGCGAAATTATGAACCAGTTGGTGCTCCAATGCTGGTTTTGACTCAGGTGGAAAGGGTTAACATACATGTAATGCAGCAAGATGACAGCAATTTTCTGGAAAAAAAGGAAAAGGGAATGGAGAATGAGACCTTACTAAATGAAACAAGTGGCAAGTTTTTTGAAGATTCAAATACCGAAAATGAATCACCTCGATTTGGATTCAAAATCAGAGAGATTCATCTTTCAGGTGTCCTTACCAAATCCGGAAGCAAGCAACATTGGGGTACTGTAACTCAGCAACAGTCTGGGATCCGGTGGTTGCTTGCCAGTGGCATGGCTAGTACTGTCAAATATTCAACTTCAACATCAAAGGCAATTGTTTTGTCATCTCCACTGTGTACCAAGAAGTTGCTGAATGAGGACACGCTCTGGAGCATTTCTTGTGTTAATAATAGTAAAGAGCTGCTTGCTGAAAATGTACACATTCGGAACCCTGATATCATCTTCCCAAGTTGA 3246 0.4097 MMKSMFECGNQDANVDDGDLNWNNGHLLLQDIQEISKALYAPSRPSFSSVHNRSKSAGKTRLSKSQVALTPGFLKDDLLSKDKKLSSAWNWKKPLKALTHIGDQKIKCCFNLHVHSIEGLPLSFDSIRLCVVWKRKSNILQTRPSRVIQGVVEFNETLSHGCSVYVSRAVSGHSLKYESKRFLIYAFIVGAPEHDIGSHQVDLTRLLPLTLAELGGDRSSGKWSTSFRLAGKAVGASLNVSFSYQIVKDELTQFGGDNLNVLNLINMKPGRPSSTSMNFGPGPFHSDDAILSREALMNSGSSLSKSISFLYQKLDEENIHDSGQADSEHFEPLKSHVIESKSPQESNFEADDTEISIIEQVETLEGDPLKNDQAGNQTVDLSTVEIINVDDIIKDDDISVDKNTSFDSMDDIYTSCVNGTVAGDSKHKCSSSCLSLTCIKDVDILPETSEFLDQEHYPIVKSNYKSHRMAKKSSSLDSITESIANDFLNMLAIESGSFGSSRDGDPHSPREKLLRQFEKEALASGNFTFDFNANEEELKTETLGHSYDDCTVDSDLSLFIQAAEEEHARENQLLMQRRKAKILEDLETDSLMQLWGLNERDFENSPGTCSGGFGSPIELPNEESCMLPSIGQGLGSFVQIMGGGFLRSMSPSLFKNAKNCGNLITQASNPVVLPAEMGNDILDILQHVASDGVEELCHHIYKLLPLQDITGKSIEHISWEAITNKGTPERQGTWQHDSFDEFHCNYLTDEGMSLDTVSLEAIAPMTVDKIETLLIEGLRVQSGMLYEEAPSYMLPQHAKTPFIGSRRANWKWFPTSERGDKMKLEDGGEIGHDDHGLMGLSVTLDQWLRLDSGIIEGDQNSEQILKILQVHHSKITELLHDGGLKNAMDQVKAFGRKHGLLGNHLTVAYMIQLRNPLRNYEPVGAPMLVLTQVERVNIHVMQQDDSNFLEKKEKGMENETLLNETSGKFFEDSNTENESPRFGFKIREIHLSGVLTKSGSKQHWGTVTQQQSGIRWLLASGMASTVKYSTSTSKAIVLSSPLCTKKLLNEDTLWSISCVNNSKELLAENVHIRNPDIIFPS* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1688 1081 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 104 248 IPR019448 -
Vra6g1688 1081 ProSiteProfiles C2 NT-type domain profile. 98 246 IPR019448 -
Vra6g1688 1081 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1081 IPR039614 -
Vra6g1688 1081 MobiDBLite consensus disorder prediction 44 63 - -
Vra6g1688 1081 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 2 2 1081 IPR039823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1688 Vra-Chr6 32937120 32941052 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1688 - - gmx:102659940 1682.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1688 6 32937120 32941052 Vra6g1688 6 32937120 32941052 ECH