Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1681 ATGGGTGAGAACACTGACGTTACCGTCACCACCAAAGCCAAAACCAAAACCCTTTTCTCTCTTCTAACACAACCAATCCAATGGCTGCAAATGCTCTCCTCAAAGCTAAACCCTTCCTTCGTCATCGGCGTCTTCCTCATCTACGGTTTAGGGCAAGGGCTCTCGGGCTCACTCTTCAAGGTAGTGGCAGACTACTACTGGAAAGACGTGCAGAAGCTTCAACCCTCCACCGTTCAACTCTTCGTAGGTGTTTACTTCATCCCCTGGGTTCTCAAACCTCTCTGGGGACTCCTCACCGACGCCTTCCCCGTTAGAGGATACCGTCGCCGACCCTACTTCATCATCTCCGGTCTCATCGGCACCGTCTCCGCCGCCACTGTCGCGCTCACCGGGAACCTCGCCGCCACAGCCGCGCTCATGTGCTTCCTTGGCGTGTCCGCCTCGCTCGCGATCGCGGATGTCACAATCGATGCGTGTATTGCGAGGAACAGCATCGAGGTGAGGGAGCTGGCGCCGGACTTGCAGAGCCTCTGCGGGTACTTCTCCGGCGCCGGCGCCCTCGTCGGATACCTCGCGAGTGGGTTCTTCGTGCACCGCCTCGGACCCCAGGAGTCGCTTGGTCTCTTGGCGCTTTCTCCTGCTTTGACGATTGTGCTGGGTTTTGTGATATATGAAAACAGAACTTCGCATATTGAAAAGAAACAGATTTCACAGGCAGTGATGAAGAATGTAGGAACGACTATCAGAAGCATTTTCAAGACAATTAGGTATCCTCAAGTGTGGAAGCCTTCTCTGTTCATGTTCCTTTCCCTGGCTTTGAATGTAACCACCCACGAAGGCCATTTTTATTGGTATACAGATCCAAAACTTGGCCCTGCATTCTCTCAGGAGTTTGTAGGGGTGATCTATGCAATCGGTGCAGTGGCATCATTGATAGGGGTATTAATCTACCACAAGGCTCTTAAAGACTACGCATTCAGAGACCTGGTATTCTATGCACAACTCCTATATGGCATATCTGGTGTGCTGGATCTGATCTTCATCCTTCGTTGGAACTTGATCATTGGAATCCCTGACTACTTCTTTGTTGTCATTGAAGAAAGTGCTACAAGAATTACAGGCAAAATCAGATGGATGCCCATGATGGTGCTGAGCACCCAGTTGTGCCCTTTAGGCATTGAGGGCACATTTTTTGCTCTGTTAATGTGCATTGATAGCATGGGTGCCCTCTTATCCAGGTGGGGTGGAGGGTTGCTGCTTCGTCTTCTCCACATCACCAGAACTGACTTCACAAACCTTTGGTTGGCTGTTCTCATAAGGGATTTGCTCAGGTTTTCAATACTTGCTTTGGTTTTTCTTGTCCCTAAAACAGGTCAATACGAGGAACTGCTTCCTTCTGATGTTTCAGAAAATAACACGGTTCATGATGTAGATGAAGAGAATTTGGAACTTGTCCCTTTCAATGGAAAGACTGAACTTTAG 1482 0.4946 MGENTDVTVTTKAKTKTLFSLLTQPIQWLQMLSSKLNPSFVIGVFLIYGLGQGLSGSLFKVVADYYWKDVQKLQPSTVQLFVGVYFIPWVLKPLWGLLTDAFPVRGYRRRPYFIISGLIGTVSAATVALTGNLAATAALMCFLGVSASLAIADVTIDACIARNSIEVRELAPDLQSLCGYFSGAGALVGYLASGFFVHRLGPQESLGLLALSPALTIVLGFVIYENRTSHIEKKQISQAVMKNVGTTIRSIFKTIRYPQVWKPSLFMFLSLALNVTTHEGHFYWYTDPKLGPAFSQEFVGVIYAIGAVASLIGVLIYHKALKDYAFRDLVFYAQLLYGISGVLDLIFILRWNLIIGIPDYFFVVIEESATRITGKIRWMPMMVLSTQLCPLGIEGTFFALLMCIDSMGALLSRWGGGLLLRLLHITRTDFTNLWLAVLIRDLLRFSILALVFLVPKTGQYEELLPSDVSENNTVHDVDEENLELVPFNGKTEL* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1681 493 TIGRFAM fbt: folate/biopterin transporter 23 467 IPR004324 GO:0016021
Vra6g1681 493 Gene3D MFS general substrate transporter like domains 23 454 IPR036259 -
Vra6g1681 493 CDD MFS_FBT 43 452 - -
Vra6g1681 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 6-RELATED 4 483 - -
Vra6g1681 493 SUPERFAMILY MFS general substrate transporter 42 439 IPR036259 -
Vra6g1681 493 Pfam BT1 family 260 457 IPR039309 -
Vra6g1681 493 Pfam BT1 family 52 235 IPR039309 -
Vra6g1681 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 4 483 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1681 Vra-Chr6 32851275 32854123 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1681 - - gmx:100806186 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1681 6 32851275 32854123 Vra6g1681 6 32851275 32854123 ECH