Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1680 ATGAGACACAGATTATCTTCCATATTCCAATCAAAGAAAGGACGAAACTTGAGAAATCTCTTGAGTTTGCAACCACCAAAAATGTCCTCCATGGCTTTCTCCACCACCTTCTTCACACCCCTCCATGATTTCACCCATGCCAGAACAAACCCACCAACTTCTCCCTCTTTTCCTTTCGTCAAATCCTCCTTTGCTTCCTCCAACTCAACCTTTTTTGATCCTTCCCTTTCCCTACGAACCTCATCAACTTTTCCAAGGCTCTTCATAAAGCCTAGGTCTTTCTCAGTTCATGCCAGAGCTGCCACAGAAAAGACCATCTATGATTTTACTGTCAAGGATATTGACAGAAAGGATGTCGCTCTTAGCAAGTTTAAGGGGAAGGTTCTATTGATTGTCAATGTTGCTTCACGATGTGGTTTGACGTCATCGAATTACTCGGAGCTGTCTCGTTTGTATGAAAAGTATAAGGATCAAGGTTTGGAGGTTCTAGCTTTCCCCTGCAATCAATTTGGTATGCAGGAGCCTGGATCGAATGAAGAAATTAAGCAGTTTGCTTGCACTCGATATAAAGCAGAATTTCCAATTTTTGACAAGGTGGATGTCAATGGACCATTTACGGCTCCAGTGTACAGTTTTCTGAAATCTAGTGCTGGAGGCTTTCTGGGTGATCTTATAAAGTGGAATTTTGAGAAATTCTTGGTTGATAAAAATGGTAAAGTTATTGAAAGATACCCACCAACAACGTCTCCTTTCCAAATTGAGAAGGATATTCAGAGGTTACTTGCTGCATGA 792 0.4129 MRHRLSSIFQSKKGRNLRNLLSLQPPKMSSMAFSTTFFTPLHDFTHARTNPPTSPSFPFVKSSFASSNSTFFDPSLSLRTSSTFPRLFIKPRSFSVHARAATEKTIYDFTVKDIDRKDVALSKFKGKVLLIVNVASRCGLTSSNYSELSRLYEKYKDQGLEVLAFPCNQFGMQEPGSNEEIKQFACTRYKAEFPIFDKVDVNGPFTAPVYSFLKSSAGGFLGDLIKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQRLLAA* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1680 263 ProSiteProfiles Thioredoxin domain profile. 100 262 IPR013766 -
Vra6g1680 263 CDD GSH_Peroxidase 105 257 IPR000889 GO:0004602|GO:0006979
Vra6g1680 263 Gene3D Glutaredoxin 92 263 - -
Vra6g1680 263 PANTHER PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE 1, CHLOROPLASTIC 42 263 - -
Vra6g1680 263 PRINTS Glutathione peroxidase family signature 124 141 IPR000889 GO:0004602|GO:0006979
Vra6g1680 263 PRINTS Glutathione peroxidase family signature 160 176 IPR000889 GO:0004602|GO:0006979
Vra6g1680 263 PRINTS Glutathione peroxidase family signature 225 234 IPR000889 GO:0004602|GO:0006979
Vra6g1680 263 PANTHER GLUTATHIONE PEROXIDASE 42 263 IPR000889 GO:0004602|GO:0006979
Vra6g1680 263 ProSitePatterns Glutathione peroxidases active site. 126 141 IPR029759 -
Vra6g1680 263 ProSitePatterns Glutathione peroxidases signature 2. 163 170 IPR029760 -
Vra6g1680 263 ProSiteProfiles Glutathione peroxidase profile. 96 263 IPR000889 GO:0004602|GO:0006979
Vra6g1680 263 Pfam Glutathione peroxidase 106 214 IPR000889 GO:0004602|GO:0006979
Vra6g1680 263 SUPERFAMILY Thioredoxin-like 105 262 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1680 Vra-Chr6 32831352 32834797 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1680 K00432 - gmx:100305775 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1680 6 32831352 32834797 Vra6g1680 6 32831352 32834797 ECH