Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1672 ATGCAGAGACTCAAAGCTCTGCTACCGCAAACAAGGGCCTCACTTCGCACTATCTATTCTTACCATCGAGCTTTCTCTGCTCAACCAAATTACGCAGAGCATGACGATGACGATTCTCAGGAGCAGATTCTAGTCGAAGGAAGAGCAAAATCACGAACAGCTATTCTCAACAGGCCTTCTTCGCTGAACTCGCTCAATGCGTCCATGGTTGGTCGATTGAAGAGGCTGTATGATTCGTGGGAAGAGAACTCTGACATTGGATTTGTTTTGATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTGCAGATGTTCTTAGGTTGTATCACACACTCAATGAAGGAAATGCCGACGAAGCTGAACAGTTTTTCAAAACATTATATTCATTTGTATATCTTCAAGGGACTTATCTTAAACCACATGTTGCCATTTTGGATGGAATAACAATGGGATGTGGATCTGGAATTTCTCTACCAGGGATGTTTCGTGTTGTAACAGATAAAACGTTTTTTTCTCACCCAGAGGCTCAAATAGGTTTCCACCCAGATGCAGGAGCTTCTTATATTTTGTCTCGGCTACCTGGCTACTTGGGGGAATACTTAGCTCTTACTGGAGATAAGCTTAATGGTGTTGAAATGATTGCCTGCGGCCTTGCTACTCATTATTCATTAAATGCAAGGCTTGCTTTGCTTGAAGAACAACTCGGTAAACTAATCACAGATGAACCTTCTGTTGTTGAGGCATCCCTTGCACAGTATGGTGATATTGTTTACCCAGATAAGGGCAGTGTCCTTCACAGGATTGATACTATCGACAGATGTTTCAGTCATGACACTGTGGAGGAAATTATTGAAGCTCTGGAGAAAGAGGCTGTCGAGTCTTATGACAGTTGGTGCTCGACTACTCTAAGGAGAATAAGAGAAGCCTCCCCATTGAGTTTAAAAGTTATCTTACGATCTATACGTGAAGGTAGATTTGAGACTCTCGATAAATGTCTCGTACGTGAGTACCGTATGTCCATACGTGGAATTTCTAAGAATGTCTCGTCCGATTTCTTTGAGGGTGTTCGAGCAAGAATGGTTGATAAAGATTTTGCACCAAAGTGGGATCCACCTAGTTTAAAAGAAATATCAGAGGACGTGGTTGATTACTATTTCTCTCCATTAGAGTCTGAACTAGTGCTGCCGACGGCTTTGAGAGAACCTTACATGTGA 1212 0.4257 MQRLKALLPQTRASLRTIYSYHRAFSAQPNYAEHDDDDSQEQILVEGRAKSRTAILNRPSSLNSLNASMVGRLKRLYDSWEENSDIGFVLMKGSGRAFCSGADVLRLYHTLNEGNADEAEQFFKTLYSFVYLQGTYLKPHVAILDGITMGCGSGISLPGMFRVVTDKTFFSHPEAQIGFHPDAGASYILSRLPGYLGEYLALTGDKLNGVEMIACGLATHYSLNARLALLEEQLGKLITDEPSVVEASLAQYGDIVYPDKGSVLHRIDTIDRCFSHDTVEEIIEALEKEAVESYDSWCSTTLRRIREASPLSLKVILRSIREGRFETLDKCLVREYRMSIRGISKNVSSDFFEGVRARMVDKDFAPKWDPPSLKEISEDVVDYYFSPLESELVLPTALREPYM* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1672 403 CDD crotonase-like 43 220 - -
Vra6g1672 403 Gene3D - 36 396 - -
Vra6g1672 403 Pfam Enoyl-CoA hydratase/isomerase 52 385 IPR045004 -
Vra6g1672 403 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL 29 403 - -
Vra6g1672 403 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 29 403 IPR032259 GO:0003860
Vra6g1672 403 SUPERFAMILY ClpP/crotonase 41 371 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1672 Vra-Chr6 32719021 32738905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1672 1 403 Acyl Lipid Metabolism Gene Families AT4G31810 68.856 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1672 K05605 - gmx:100808892 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1672 6 32719021 32738905 Vra6g1672 6 32719021 32738905 ECH