Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1665 ATGAACAACGGTGTTAGGCAAGAATCCAGTGTGCTTCTCGATTTGGCATCCCACGTCAATCGCTTCGCCTTCGATCATTTTCGCACCGACACCGCTGTGCAATCCAGTTTCCTGCGCTTCAATGGCGGGGCGGGAGCCAAACGCGGCGTTTCGCTCAGGGTGGGGGCGGCTGGAGTTAGGGTCAGGAATATTTTGAGCGAGTTTAATAGAGCAGTTAGGTTTCACTGCGAGAAGATTCCGATTGGGTTCGCCTCGCTGCGAGTCGCGGAGGGCGACGGTGGTGGTGGTGGTGGCTGTGACGGGGACGGGGATGGGAGTGGGGTTAGAGTGGATGAGTGTGGCGGGGTGGAGAACGAGGGGCTTCGCGGGAATGGCGTGGAGGGTTTGAGGCCCAAAAAAGTTTTGATTTTGATGAGTGACACTGGTGGTGGGCATCGAGCTTCCGCTGAAGCTATCAAGGCTGCTTTCTATGAAGAATTTGGAGATGATTACCAGGTTTTCGTTACTGATTTGTGGGCTGATCACACACCTTGGCCGTTCAACCAACTTCCCAGGAGCTATAGCTTTTTGGTGAAGCACGGGCCATTGTGGAAGATGACTTACTATGGAACTGCCCCACGAGTTGTGCACCAGTCTAATTTTGCAGCAACTGGAACTTTCATAGCTCGTGAGGTTGCTAAAGGTCTAATGAAATATCAACCAGATATAATAATCAGTGTGCATCCACTGATGCAGCACGTTCCACTTCGAATTTTGAGGTCAAAGGGTCTTTTAGATAAGATTGTTTTTACTACAGTTATCACAGATTTAAGCACATGCCATCCAACGTGGTTTCATAAGCTCGTAACTAGATGCTATTGTCCTACAACAGATGTTGCGCAAAGGGCATTGAAAGCAGGATTGCAGCAATCCCAAATAAAGATTTTTGGTCTACCTGTCCGGCCTTCCTTTGTTAAGCCTGTCCGGCCAAAGGATGAACTAAGGAGAGATCTAGGGATGGATGAGGATCTTCCTGCTGTATTATTGATGGGGGGAGGGGAAGGTATGGGTCCCATTGAGGCTACTGCTCGAGCACTTGGAGATTCATTATACGACGAGAATATTGGGGCCCCTGTAGGTCAGATCCTAGTGATCTGTGGACGGAATAAGAAACTTCTTAACAAACTGACTTCTATTAATTGGAAGGTTCCTGTGCAGGTCAAGGGATTTGTTACCAAAATGGAGGAATGCATGGGAGCTTGTGATTGCATCATCACAAAGGCGGGTCCAGGGACGATTGCAGAAGCCCAGATCAGAGGCCTCCCTATTATTCTGAATGATTACATCGCTGGACAGGAAGCTGGCAATGTCCCCTATGTAGTTGAAAATGGATGTGGAAAGTTCTCTAAATCTCCTAAACAGATAGCAAAAATTGTTGCCGATTGGTTTGGTCCTAAAGCCTACGAGCTAGAACAAATGTCACAAAATGCATTGAGGCTGGCAAGGCCAGACGCTGTGTTCAAGATTGTTCATGACCTTCACGAGCTGGTTAGACAAAGAAGCTACCTTCCAGAATATTCTTGTACAGCTTAA 1572 0.4796 MNNGVRQESSVLLDLASHVNRFAFDHFRTDTAVQSSFLRFNGGAGAKRGVSLRVGAAGVRVRNILSEFNRAVRFHCEKIPIGFASLRVAEGDGGGGGGCDGDGDGSGVRVDECGGVENEGLRGNGVEGLRPKKVLILMSDTGGGHRASAEAIKAAFYEEFGDDYQVFVTDLWADHTPWPFNQLPRSYSFLVKHGPLWKMTYYGTAPRVVHQSNFAATGTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRSKGLLDKIVFTTVITDLSTCHPTWFHKLVTRCYCPTTDVAQRALKAGLQQSQIKIFGLPVRPSFVKPVRPKDELRRDLGMDEDLPAVLLMGGGEGMGPIEATARALGDSLYDENIGAPVGQILVICGRNKKLLNKLTSINWKVPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAQIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKSPKQIAKIVADWFGPKAYELEQMSQNALRLARPDAVFKIVHDLHELVRQRSYLPEYSCTA* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1665 523 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 145 313 IPR009695 GO:0009247|GO:0016758
Vra6g1665 523 CDD GT28_Beta-DGS-like 134 511 - -
Vra6g1665 523 Gene3D Glycogen Phosphorylase B; 323 494 - -
Vra6g1665 523 Pfam Glycosyltransferase family 28 C-terminal domain 373 459 IPR007235 GO:0016758
Vra6g1665 523 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 76 513 - -
Vra6g1665 523 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 132 509 - -
Vra6g1665 523 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 76 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1665 Vra-Chr6 32554648 32560581 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1665 55 523 Glycosyltransferase AT4G31780 73.642 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1665 K03715 - gmx:547469 953.74