Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1663 ATGGAAACTAATTGGCTTCAATTAGTGACTACGCTTCCTTCACTTTCAGTCCTTTCTATGAATGATTGTCAGCTTAAAGACTTGAGCTTGTCTCTCCAGTATGCTAATTTTACTTCCCTCCAGGTTCTTGACCTTTCTTACAATGAATTCAAGTCAGAGTTACCTAAGTGGCTATTCAATCTTAGTTCCACTGTCCATAGTTTATACCTTAGCTTCAATTCTTTAATAGGACATCTACCAAAGGATTTGTTAAATCTTCGAAAACTGGAAGACCTGGTTATGGAATACAATAACTTTGATGGACCCATTCCAGATTGGTTAGGTGATTTCAAACATTTAAAAGCACTTATTCTTGGAGGAAATATGTTTTCTGGATCTATTCCTACAAATTTTGGAAATCTATCAACCTTGATTACCTTGGAAGTTGGCTCAAATACATTGACAGGAGTTGTGTCTGAGAGAAATTTAGCCAAATTGTCAAAATTAAAGTCATTGTATATTTGGTCATATTCCACGTTAATCTTTGATTTTGACTCGGATTGGATTCCACCTTTTCAACTTGAGGTATTATGGCTTGGGTTTCCAAATCTCGACTTTCCTGTGTGGTTATATACACAACGATCTATTGAATGTTTACATATTGGGGGTTCATCATTTGAGGCTACAGACAAATTTTGGAATTTTGTATCAACAATAGCTGTTGTCATATTAGAAGACAATTTGATAGACGGGGACATGTCAAATGTGTTGTTGAACTCTACATTCATTGAACTATCATCAAATGGTTTGAAAGGTTGTTTGCCTAAATTATCACCAAACGTGGTTATTGTCTCGTTATCAAATAATTCATTATCAGGAGAATTGTCTCACCTCTTATGTTGTCATAATGTGTCGAAAGGGAAAAATAAATTGTTGTACTTGGACATATCATTCAATAATGTATCTGGAGGGCTTACGAATTGTTGGAAGAATTGGAAATCTTTGGTTGCTATACACTTGGGAAGCAATAATCTATCAGGAAAGATACCTCCATCACTAGGCTTCTTATCTAATCTCACCTCACTCCATTTGCACGAGAATAAACTACATGGTGTGATTCCTCTGTCATTGCGTAATTGTCACTCTCTATTGGTCTTTAATGTTCGCAATAACCAATTATCAGGAAACATACCATATTGGATATCTCATGGTGTATTGGCTCTCCAATTAAGGTCCAATTATTTTAGTGGTAAAATCTCACCACAAATATGTGAAATGTCTTCCCTCATTGTGTTGGATATTGCACAAAACACAATCTCCGGTCATATACCCAGTTGTCTTGGTAATATCAAAACCCTACTTTTCAACAATGTCTCACGCCACAAACTTTCCTTTGAATTTTCTTCATTTGATGATCGTTACTTAATCAATGACGACAGTCTTGAATTGGTTACTAAAGGTCAAGTATTAGAATATAGAAGAAACCTACACTTTATGACCTTAATTGATATGTCAAGTAATAATTTGTCCGGAACAATACCTCCACAAATGTTTAGTCTCATTGGATTGTCTTCCTTGAATTTATCCAACAACAAATTAGAAGGAGAAATACCAAATGAGATAGGAAACATGAAAAACTTAGAGTCTCTCGATTTTTCTACAAACCAATTTGGGGGAGAAATTCCTCAGAGCTTATCCAGATTATCCTTTTTGGGTTACTTGAACCTGTCATTCAACAATTTGACAGGCAAAATACCATCAGGAACACAACTTCAGGGATTCACTGCACTTAGTTACATGGGCAATCATGATCTTTGTGGGCCCTCACTTGCAAAAATTTGCTTTCAGAATGATAAACATGAACACACAAAGCTTGTAGACGAAGACGGAAATCAATCTCAATTTTTGCCATGGTTTTATATCGGAATGGAATCCGGATTTGTCACTGGCTTTTTGGGAGTTTGTTGTGCTATTTTCTTAAGCGAAAAGTTGAGGCATGCTTTCTTCAAGTTTCTTTATGACTTGAAAGATCGACTTCATATCATGGTGGTGGTAAACATTATTCGCTTCAGTTAA 2055 0.3567 METNWLQLVTTLPSLSVLSMNDCQLKDLSLSLQYANFTSLQVLDLSYNEFKSELPKWLFNLSSTVHSLYLSFNSLIGHLPKDLLNLRKLEDLVMEYNNFDGPIPDWLGDFKHLKALILGGNMFSGSIPTNFGNLSTLITLEVGSNTLTGVVSERNLAKLSKLKSLYIWSYSTLIFDFDSDWIPPFQLEVLWLGFPNLDFPVWLYTQRSIECLHIGGSSFEATDKFWNFVSTIAVVILEDNLIDGDMSNVLLNSTFIELSSNGLKGCLPKLSPNVVIVSLSNNSLSGELSHLLCCHNVSKGKNKLLYLDISFNNVSGGLTNCWKNWKSLVAIHLGSNNLSGKIPPSLGFLSNLTSLHLHENKLHGVIPLSLRNCHSLLVFNVRNNQLSGNIPYWISHGVLALQLRSNYFSGKISPQICEMSSLIVLDIAQNTISGHIPSCLGNIKTLLFNNVSRHKLSFEFSSFDDRYLINDDSLELVTKGQVLEYRRNLHFMTLIDMSSNNLSGTIPPQMFSLIGLSSLNLSNNKLEGEIPNEIGNMKNLESLDFSTNQFGGEIPQSLSRLSFLGYLNLSFNNLTGKIPSGTQLQGFTALSYMGNHDLCGPSLAKICFQNDKHEHTKLVDEDGNQSQFLPWFYIGMESGFVTGFLGVCCAIFLSEKLRHAFFKFLYDLKDRLHIMVVVNIIRFS* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1663 684 Gene3D Ribonuclease Inhibitor 2 179 IPR032675 -
Vra6g1663 684 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 65 665 - -
Vra6g1663 684 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 2 125 - -
Vra6g1663 684 SMART LRR_typ_2 349 372 IPR003591 -
Vra6g1663 684 SMART LRR_typ_2 37 61 IPR003591 -
Vra6g1663 684 SMART LRR_typ_2 561 584 IPR003591 -
Vra6g1663 684 SMART LRR_typ_2 12 34 IPR003591 -
Vra6g1663 684 SMART LRR_typ_2 513 537 IPR003591 -
Vra6g1663 684 Gene3D Ribonuclease Inhibitor 180 610 IPR032675 -
Vra6g1663 684 Pfam Leucine Rich Repeat 516 536 IPR001611 GO:0005515
Vra6g1663 684 SUPERFAMILY L domain-like 9 243 - -
Vra6g1663 684 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 2 125 - -
Vra6g1663 684 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 65 665 - -
Vra6g1663 684 SUPERFAMILY L domain-like 256 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1663 Vra-Chr6 32529017 32532058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1663 12 645 Receptor kinase-like Gene Family AT2G33060 31.758 9.74e-67 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1663 - - vra:106764332 1355.5