Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1662 ATGCATGCTCTCTTAAACTTCAAGCAAGGAGTTACAGATCCCTCAGCTGTTCTTTCCTCATGGACCACTCAACTAGATTGTTGTCATTGGAAAGGAGTCATCTGTAGCAACATCACTAGTAGAGTCACTGGAATCACTCTCCCATGTTCTACAACTCCTCCAATTTATAGTGACGGAGAAGATAAATCACATTGCCTTACAGGTTCCATTCACCTCTCCTTGTTGTTAGTGGAGTTGGAATTTTTAGATTACTTGAATTTGAGAAACAATGACTTCTTAGCATTACAATTTGATTATCTGCATAATCATAATTGTCACAATCGATCTATACCTACTTCTTCTCATAGTCAGTGTGTCAATTATTCAATTCTTCGTCATCTTGATTTAGCATATAACTGGAATCTTGTTATCAATAACCTTAAATGGCTTCCCAACATTTCCTCACTGGAATATCTTAACCTCCGTGACATTGATCTTAGCAAGGAAAGTAATTGGCTTCAATTAGTGACTATGCTTCCATCACTTTCATTCCTCAATATGGATGATTGTCAACTTAAAGACTTGAGTTCGTCTCTCCAGTATGCAAATTTTACTAAACTTGAATTTCTTAGTCTTTCTGCAAATGAATTTAACTCAGAGTTGCCTAAGTGGTTATTCAATCTTAGTTCTGGTATTTATCAGTTAGATCTTAGCTCAAGTTCTCTAATAGGACATCTACCTAAGGACTTGTTAAATCTTCGAGAACTGGAAGACCTGAACATGGAAGACAATAACTTTGATGGACCTATTCCAGATTGGTTAGGTGGTTTCAAACATTTAGAAACTCTTATTCTTGGAGTAAACAAATTTTCAGGATCTATTCCCACAAATTTGGGAAATCTATCAACCTTGATTATCTTGGATGTTGCCTCAAACCCATTGACAGGAGTTGTGTCTGAAAGAAATTTAGCCAAATTGTCAAAATTAAAGGGACTGGGCATATACTCATATGTCGAATTAATCTTTGATTTTGACTCGGATTGGATTCCACCTTTTCAACTTGAGGAATTAGTAATCAAGTTTTCAAATCCGAACCTTCCTGCGTGGTTTTATACACAACGATCACTTGAAAGATTAACTATATCGGATTCATCATTTGAGGCTCCAGACAAATTTTGGCAATTTGTATCATCAGTGATTGAACTCGAATTAGAAGGCAATTTGATAGACAGAGACATGTCAAATGTGTTGTTGAACTCTACATTCATTGATATATCGTCAAATGGTTTGAAAGGTTGGTTGCCTCAATTATCAGCAAACGTGGTTTTTGTCTCATTATCAAATAATTTATTATCAGGAGAATTGTCTTCCCTCTTATGTGATCATAATGTGTCGAATAGGAAAATCAATGTGTTGTACTTGGACATATCATTTAATAATCTATCTGGAGGGCTTACGAATTGTTGGAAGAATTGGAAATCTTTGGTTGCTATTCACTTAGGAAGCAATAATCTATCAGGAAAGATACCTCCTTCACTAGGCTTCTTATCTAATCTCAACTCACTCCATTTGCATGAGAATAAACTACATGGTGAGATTCCTCTATCATTGCAAAATTGTCGCTCTCTATTGGTCTTTAATGTTCGCAATAACCAATTATCAGGAAACATACCAGATTGGATATCTCATGGTGTATTGGCTCTCCAATTAAGGTCCAATGATTTTAGTGGTAAAATATCACCACAAATATGTGAAATGTCTTCCCTCATTGTGTTGGATATTGCACAAAACACAATCTCCGGTCATATACCCAGTTGTCTTGGTAATATCAAAACCCTGCTTTTCAACAATGTTTCACGTAACAAGCTTTCTATTCGATTTCCTTCATCATATCCGGGTCGTTACTACTTCAGCGATGACAGTCTAGAATTGGTTACTAAAGGTCAAGTATTAGAATATGATCGCAACCTACACTTTATGACCTTAATTGATATGTCATGTAACAATTTGTCCGGCACAATACCTCCACAACTGTTTAGTCTCATTGGATTGCATTCCTTGAATTTATCAAACAACAAATTAGAAGGAGAAATACCAAATGAGATAGGAAATATGAAAAACTTGGAGTCCCTCGATTTTTCAACAAACCAACTCGGGGGAGAAATTCCTCAAAGTTTATCCAGATTGTCCTTTTTGGGTTACTTGAACCTGTCATTCAACAATTTGACAGGCAAAATACCATCAGGCACACAACTTCAGGGATTCAGTACACTTAGTTACATGGGAAATGATGATCTTTGTGGACCCCCACTTACCAAAATCTGCTTTCAGGATGACAAACATAAAGACACAGAGCCTGTAGACGAACACAGAAATCAATCTGAATTTTTGCCATGGTTTTATATTGGAATGGAATCCGGATTTGTGACAGGCTTTTTAGGAGTTTGTTGTGCTATTATCTTCAACAAAAAGTTAAGACATGCTTTCTTCAAGTTTCTTATGACTTGA 2487 0.3611 MHALLNFKQGVTDPSAVLSSWTTQLDCCHWKGVICSNITSRVTGITLPCSTTPPIYSDGEDKSHCLTGSIHLSLLLVELEFLDYLNLRNNDFLALQFDYLHNHNCHNRSIPTSSHSQCVNYSILRHLDLAYNWNLVINNLKWLPNISSLEYLNLRDIDLSKESNWLQLVTMLPSLSFLNMDDCQLKDLSSSLQYANFTKLEFLSLSANEFNSELPKWLFNLSSGIYQLDLSSSSLIGHLPKDLLNLRELEDLNMEDNNFDGPIPDWLGGFKHLETLILGVNKFSGSIPTNLGNLSTLIILDVASNPLTGVVSERNLAKLSKLKGLGIYSYVELIFDFDSDWIPPFQLEELVIKFSNPNLPAWFYTQRSLERLTISDSSFEAPDKFWQFVSSVIELELEGNLIDRDMSNVLLNSTFIDISSNGLKGWLPQLSANVVFVSLSNNLLSGELSSLLCDHNVSNRKINVLYLDISFNNLSGGLTNCWKNWKSLVAIHLGSNNLSGKIPPSLGFLSNLNSLHLHENKLHGEIPLSLQNCRSLLVFNVRNNQLSGNIPDWISHGVLALQLRSNDFSGKISPQICEMSSLIVLDIAQNTISGHIPSCLGNIKTLLFNNVSRNKLSIRFPSSYPGRYYFSDDSLELVTKGQVLEYDRNLHFMTLIDMSCNNLSGTIPPQLFSLIGLHSLNLSNNKLEGEIPNEIGNMKNLESLDFSTNQLGGEIPQSLSRLSFLGYLNLSFNNLTGKIPSGTQLQGFSTLSYMGNDDLCGPPLTKICFQDDKHKDTEPVDEHRNQSEFLPWFYIGMESGFVTGFLGVCCAIIFNKKLRHAFFKFLMT* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1662 828 SUPERFAMILY L domain-like 172 424 - -
Vra6g1662 828 SMART LRR_typ_2 674 697 IPR003591 -
Vra6g1662 828 SMART LRR_typ_2 698 722 IPR003591 -
Vra6g1662 828 SMART LRR_typ_2 197 221 IPR003591 -
Vra6g1662 828 SMART LRR_typ_2 172 194 IPR003591 -
Vra6g1662 828 Pfam Leucine rich repeat N-terminal domain 2 36 IPR013210 -
Vra6g1662 828 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 2 278 - -
Vra6g1662 828 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 227 826 - -
Vra6g1662 828 Gene3D Ribonuclease Inhibitor 139 224 IPR032675 -
Vra6g1662 828 SUPERFAMILY L domain-like 2 222 - -
Vra6g1662 828 SUPERFAMILY L domain-like 415 765 - -
Vra6g1662 828 Gene3D Ribonuclease Inhibitor 1 123 IPR032675 -
Vra6g1662 828 Gene3D Ribonuclease Inhibitor 334 771 IPR032675 -
Vra6g1662 828 Gene3D Ribonuclease Inhibitor 225 333 IPR032675 -
Vra6g1662 828 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 227 826 - -
Vra6g1662 828 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 2 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1662 Vra-Chr6 32492312 32495699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1662 27 811 Receptor kinase-like Gene Family AT2G33020 30.539 3.82e-70 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1662 - - pvu:PHAVU_001G042800g 1098.57