Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1623 ATGAAAGGTGTGATAATGCAGGAGGAGGGGAATCAGGAAGAGCCATATGGTGAATCTGTGGAGGAATATAAACCCAAAAGGGGGTTTTGGGACTGTTTATGCATCCCCATCCAATGGTTTAGCATGCTTTCTAGGGAAATGCATTGGAGCTTTATATTTGGGGTGGTCGTTATTTACGGAATAAGCCAGGGACTTGGTGTAGCTCTTGCTGAAGTTGGCACAAAGTATTACATGAAAGATGTTCAGAAGGTGCAGCCATCGGAGGCACAGATTTATAAAGGAATCACATCCATTCCTTGGGTTGTGAAACCTATTTGGGGTCTTCTCACTGATGTTCTCCCATTTTTTGGGTATCGCAGGAGACCTTATTTCATTTTTGCTGGAATCATAGGAGTAGTTTCCATGCTTTTATTATCTTTGCATGAAAACCTGCATCTTGTGTTGGCCCTTCTGTCATTAACGGCTGGAAGTGCTGGGGTGGCAATAGCAGATGTAACCATTGATGCTTGTGTGGCACAGAACAGTATCTCTCATCCTTCACTTGCAGCTGATATGCAAAGTTTATGTGCCGCCAGTTCTTCCATTGGATCACTATTTGGTTTCTTCATCAGTGGAGTCTTTGTTCACCTTATAGGCCCAATGGGGGTGTTTGGTTTGATGACCATCCCAGCTGGACTAGTAGTTTCTGTTGGTTTTCTGCTTTATGAGCCTCGCATGCACCACACATCATATAGACAGGTGAAACAAAATTTTGTTGATGCTTCCAAGGCCATGTGGACTACATTGAAGAGTGAAGATGTATGGAGGCCTTGTTTATACATGTATTTATCCATTGCACTGAGTTTGGATGTTCGTGAAGGAATGTTTTATTGGTATACAGAATCAAAGGGTGGACCATCTTTCTCTCAGGAGAGTGTTGGTTTTATATTTTCAATTAGTTCAGTGGGGTCACTTTTAGGTGCAATCCTATATCAGTATGCTCTGAAGGAATATGCATTCAGGAACTTGCTGTTCTGGACTCAGTTGATATATGGTTTGTCAGGGATGCTTGATCTGGTTCTGGTATTGAGATGGAACCTGAAGTTTGGCATAGCAGATTATGTGTTTGTTGTGATTGTTGAAAGCATTGCCCAAATGACCAACAGGCTAAAGTGGATGCCTATGCTTGTGCTTAGCTCAAAGCTGTGTCCCTCAGGCATTGAAGGAACCTTTTTTGCTCTCTTGATGTCAATTGATAATGTTGGACTTCTCTCTGCAGCATGGGGTGGTGGTTTTGTTCTCCACATTCTGAGGATCACAAGAACAAGGTTTGATAATATTTGGTTGGCTATTTTGATCAGGAACATCTTAAGGATCACTCCACTTTGGCTGCTGTTTTTGGTTCCTAGAGCTGACCCCAACTCTTCCATTCTCCCAACAACTGAAACCATGGATTCCGAGGTGGTCATTGAGACCTCAGACTCCAAAAATGTTGAATTGGTCTCCCTTGTACACAGTGTTGATGCTAAATAG 1512 0.4259 MKGVIMQEEGNQEEPYGESVEEYKPKRGFWDCLCIPIQWFSMLSREMHWSFIFGVVVIYGISQGLGVALAEVGTKYYMKDVQKVQPSEAQIYKGITSIPWVVKPIWGLLTDVLPFFGYRRRPYFIFAGIIGVVSMLLLSLHENLHLVLALLSLTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCAASSSIGSLFGFFISGVFVHLIGPMGVFGLMTIPAGLVVSVGFLLYEPRMHHTSYRQVKQNFVDASKAMWTTLKSEDVWRPCLYMYLSIALSLDVREGMFYWYTESKGGPSFSQESVGFIFSISSVGSLLGAILYQYALKEYAFRNLLFWTQLIYGLSGMLDLVLVLRWNLKFGIADYVFVVIVESIAQMTNRLKWMPMLVLSSKLCPSGIEGTFFALLMSIDNVGLLSAAWGGGFVLHILRITRTRFDNIWLAILIRNILRITPLWLLFLVPRADPNSSILPTTETMDSEVVIETSDSKNVELVSLVHSVDAK* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1623 503 Pfam BT1 family 63 237 IPR039309 -
Vra6g1623 503 Pfam BT1 family 272 465 IPR039309 -
Vra6g1623 503 Gene3D MFS general substrate transporter like domains 44 446 IPR036259 -
Vra6g1623 503 CDD MFS_FBT 54 459 - -
Vra6g1623 503 PANTHER FOLATE-BIOPTERIN TRANSPORTER 2-RELATED 15 502 - -
Vra6g1623 503 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 15 502 IPR039309 -
Vra6g1623 503 SUPERFAMILY MFS general substrate transporter 51 461 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1623 Vra-Chr6 31893077 31896547 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1623 - - ccaj:109816000 862.062