Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1590 ATGGATACGTTACCGACGACGAAGCGCGGCGGCGGAGGGAGATCGAAGCCCGTTCCGACCTCCAAATCCTCTCTCGTCATGGCCTTCTTCTCTTGCGTAGCCTGGCTTTACGTCGCTGGCAGGTTATGGCAAGACGCAGAGAACCGAAATGTACTTGCCGGTCTTTTAAAGAAGAATTCAGCTCAGAGGCCTAAGTTTCTTACAGTGGAAGATAAATTAATGGTGCTAGGATGCAGGGATCTGGAGAGGAGGATTGTGGAAGCTGAGATGGAATTGACATTGGCTAAGAGCCAAGGGTATCTCAAGGGGCAGGGCCAGAAAAGTGCCTCTTCTGATCGTAGGCTTCTTGCTGTTATTGGTGTGTATACTGGATTTGGAAGTCGGTTGAAGAGAAATGTCTTCAGGGGGTCTTGGATGCCCAGAGGTGATGCCTTGAAAAAACTTGAAGAAAGAGGAGTGGTCATTCGATTTGTTATTGGTCGGAGTGCTAATCGTGGTGATAGCTTAGATCGCAATATTGATGCGGAAAATCGCTCAACAAAGGATTTCCTGATTCTAGAAGGTCATGAGGAAGCTCAAGAAGAGTTGCCTAAGAAAGTAAAAACTTTCTTTAGCACTGCAGTTCAGAACTGGGATGCTGATTTTTATGTGAAAGTTGATGACAGCATTGATATTGATCTGGAGGGTTTAATTGAACTTCTTGATCATCGCCGTGGCCAGGATGGGGCATATATTGGATGCATGAAATCAGGAGAAGTGATATCAGAAGACGGAAAGCCATGGTATGAACCTGATTGGTGGAAATTTGGTGATGAAAAATCGTATTTCCGACATGCAGCTGGTTCACTTGTTATAATTTCAAAGAATTTGGCACAATACATTAATATAAACAGTGCATCTTTGAAGACCTATGCCTTTGATGATACATCTTTGGGATCATGGATGATGGGAATCCAAGCAACTTACATTGATGACAGTCGACTTTGCTGCAGTAGTATCAGACAAGACAAGGTATGCTCCTTGGCTTGA 1029 0.4431 MDTLPTTKRGGGGRSKPVPTSKSSLVMAFFSCVAWLYVAGRLWQDAENRNVLAGLLKKNSAQRPKFLTVEDKLMVLGCRDLERRIVEAEMELTLAKSQGYLKGQGQKSASSDRRLLAVIGVYTGFGSRLKRNVFRGSWMPRGDALKKLEERGVVIRFVIGRSANRGDSLDRNIDAENRSTKDFLILEGHEEAQEELPKKVKTFFSTAVQNWDADFYVKVDDSIDIDLEGLIELLDHRRGQDGAYIGCMKSGEVISEDGKPWYEPDWWKFGDEKSYFRHAAGSLVIISKNLAQYININSASLKTYAFDDTSLGSWMMGIQATYIDDSRLCCSSIRQDKVCSLA* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1590 342 Coils Coil 78 98 - -
Vra6g1590 342 Pfam Galactosyltransferase 130 323 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra6g1590 342 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT3 3 338 - -
Vra6g1590 342 Pfam Domain of unknown function (DUF4094) 21 98 IPR025298 -
Vra6g1590 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 338 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra6g1590 342 Gene3D - 144 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1590 Vra-Chr6 31378320 31385402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1590 74 342 Glycosyltransferase AT2G25300 79.926 4.15e-164 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1590 K20854 - gmx:100816327 637.106