Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1587 ATGAACAACACCGTTTGTTCGCCTTACTTTGATCCTGATTTTGATACTCTCCCAGAAAGATTATATGGTCCACCTTGCCGAGTCTGCATCGACAATGACAGCATGAAGGGATGCACAGTGGTCAAGGTAGATAGTGTTAACAAGGAGGGTCTTCTCCTAGAAGTGGTGCAAGTTTTGACAGACATGAACCTTCAAATCTGCAAAAGCTATATTTCATGTGATGCTGGTTGGTTCATGGATGTGTTTCATGTTAGAGACGAGAATGGCAACAAACTAACGGATCAGAAAGCCATCAACGAAATCCAACAGGCCCTAGGAAAATCAAGAGCCTCTCCACCATCACAACAATACAGCAACGTCAATTCAGTCATCACAACAATGACTAACTACAAGACCTATTCCAAGAAATTCATCCCTTTACTCTCTAACTCAACTGACCAGTACACAGCAATTGAAATGACCGGCACGGACCGTCCCGGATTATTTTCCGAGATCTCGGCTGCGTTGGTGGATCTCCGATGTAACATAGTTGAAGTCCACGCATGGAGTCATAATGCACGACTCGCATGCGTGGCTTACATATCGGATCAATCCACCGATTCTGCTATTGAGGATCCTTCTCGTCTAACCTCTATAGAGGATCACTTGACAACTGTATTGCGTGCCACCACCAATCGTAATGGTGATGGCACGAGTACTTGTCCAGATGTCAAGACCTCGGAGTTTTTAGGAGGAGAAGGGAACATGACTAGTGTGGAACGGAGGTTGCACCAGCTTATGCTTTCTGTTAGGGACTTTGAGGCTCCTTCATCTCCGAAAGAGATGAAGGGAAGGAAAAGAATGGTGACAATTGAAAGTTGTGAACAAAAGGGGTATTCAATTGTGAACATTGAGTGTAAGGATCGTCCCAGGCTCATGTTTGATACCGTTTGCACGTTAACAGACATGCAGTACGTAATTTTCCATGCTTCCATCAGTTCTCATGGAGGCTATGCATTTCAGGAGTATTTTATCAGGCACGTAGATGGATATGCTTTAGATACGGCAAGTGAAAAGGAACGAGTAATAAAATGTTTAGAGGCAGCCATAGAACGCAGGGTTTGTGAGGGAGTTAGGTTAGAGTTGTGTGCAGAGAATAGAGTAGGGTTACTGTCGGACATAACAAGAGTACTGCGAGAGAATGGGCTGGTGGTTGTTCGAGCAGACGTTGAAACGCATGGAGAGAAATCCGTGAACGCTTTCTATGTGAAAGACATATCAGGGAACGAGGTTGATGTAGAGTACTTCAGCAACTCCGTGAAGAGGGAGATGGGTCCAATCGTCACACTCCATGTCAAGAATGACACCACCAGAAGAAAATCTTCTCCTTCTCTCTCCTTTGGAGGCATGCTAAGATCTCGGATTGAACGTCTTTCTCATGGCTTCATTATATGA 1434 0.4463 MNNTVCSPYFDPDFDTLPERLYGPPCRVCIDNDSMKGCTVVKVDSVNKEGLLLEVVQVLTDMNLQICKSYISCDAGWFMDVFHVRDENGNKLTDQKAINEIQQALGKSRASPPSQQYSNVNSVITTMTNYKTYSKKFIPLLSNSTDQYTAIEMTGTDRPGLFSEISAALVDLRCNIVEVHAWSHNARLACVAYISDQSTDSAIEDPSRLTSIEDHLTTVLRATTNRNGDGTSTCPDVKTSEFLGGEGNMTSVERRLHQLMLSVRDFEAPSSPKEMKGRKRMVTIESCEQKGYSIVNIECKDRPRLMFDTVCTLTDMQYVIFHASISSHGGYAFQEYFIRHVDGYALDTASEKERVIKCLEAAIERRVCEGVRLELCAENRVGLLSDITRVLRENGLVVVRADVETHGEKSVNAFYVKDISGNEVDVEYFSNSVKREMGPIVTLHVKNDTTRRKSSPSLSFGGMLRSRIERLSHGFII* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1587 477 ProSiteProfiles ACT domain profile. 372 448 IPR002912 -
Vra6g1587 477 Pfam ACT domain 151 200 - -
Vra6g1587 477 Gene3D - 144 227 - -
Vra6g1587 477 ProSiteProfiles ACT domain profile. 150 230 IPR002912 -
Vra6g1587 477 Pfam ACT domain 372 421 IPR002912 -
Vra6g1587 477 SUPERFAMILY ACT-like 35 106 IPR045865 -
Vra6g1587 477 CDD ACT_ACR_3 292 366 - -
Vra6g1587 477 CDD ACT_ACR_2 149 222 - -
Vra6g1587 477 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 3 476 IPR040217 -
Vra6g1587 477 SUPERFAMILY ACT-like 369 421 IPR045865 -
Vra6g1587 477 SUPERFAMILY ACT-like 291 361 IPR045865 -
Vra6g1587 477 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR2 3 476 - -
Vra6g1587 477 ProSiteProfiles ACT domain profile. 40 122 IPR002912 -
Vra6g1587 477 SUPERFAMILY ACT-like 145 219 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1587 Vra-Chr6 31334921 31339529 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1587 - - gmx:100820595 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1587 6 31334921 31339529 Vra6g1587 6 31334921 31339529 ECH